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Name : SL003B_4293 (SL003B_4293) Accession : YP_004306016.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 4607375 - 4608211 bp Length : 837 bp Strand : + Note : - DNA sequence : TTGACGCCGCTGTCCATAGGTATAAAAGACGCGAGGCAACGAAAATCGTCGCCGACCGCGCCGGAAATGCTTTCGTCGGC GCCGATCGATCCGGAGAACCGCTTGACGTCCGCCCTCGTCATCATCCCTGCGCGCATGGCCGCGACCCGCCTGCCGGAAA AGCCCCTCGCCGACATTGCCGGCAAACCGATGATCGTCCGCGTCCTGGAGCAGGCCCGCAACGCCGACATCGGTCCGGTC ACGGTCGCCTGCGACGACGCGCGCATCGCCGAGGCGGTCCGCGATCACGGCGGCAGCGCCGTGATGACCCGTCCCGACCA CGAATCCGGCTCCGACCGGATCTTCGAGGCAGCCGCCCTCATCGACCCCGACGCCAGACACGGCGTGGTGCTGAATCTCC AGGGCGACGTGCCGCTGATCGAACCTGCGGCGCTGCGCGCCGCGTTCGATCCCCTAGGCGATCCGGCGGTCGACATCGGC ACCATCATGACCGAGATCAGGACGGCCGAGGGACGCGTCGATCCGAGCTATGTCAAGGCCGTCGCCACACCGCTCGGCGG AGCGCGCCACCGCGCCCTCTATTTCACCCGGGCCACGGCCCCGTCCGGCGACGGGCCCCTCTACCAGCATATCGGCGTGT ACGCCTACCGGCGCCGCGCGCTCGAGCGTTTCGTCGCGCTGCCACCCTCACCGCTCGAACTGCGTGAAAAGCTGGAGCAA CTCCGCGCACTCGAAGCCGGCATGCGCATCGACGTCAGCCTCGTCGGCAGCGCGCCGATGGATGTCAACACGCCGCAGGA CCTCGAACGGGTGCGTAAAATTTTCGAAGCCCTGTAG Protein sequence : MTPLSIGIKDARQRKSSPTAPEMLSSAPIDPENRLTSALVIIPARMAATRLPEKPLADIAGKPMIVRVLEQARNADIGPV TVACDDARIAEAVRDHGGSAVMTRPDHESGSDRIFEAAALIDPDARHGVVLNLQGDVPLIEPAALRAAFDPLGDPAVDIG TIMTEIRTAEGRVDPSYVKAVATPLGGARHRALYFTRATAPSGDGPLYQHIGVYAYRRRALERFVALPPSPLELREKLEQ LRALEAGMRIDVSLVGSAPMDVNTPQDLERVRKIFEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 5e-35 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-34 | 41 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-34 | 41 |
