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Name : SL003B_4285 (SL003B_4285) Accession : YP_004306008.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Unknown Product : peptide ABC transporter permease/ATPase Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 4597192 - 4598835 bp Length : 1644 bp Strand : - Note : - DNA sequence : ATGACCGTCGGATCCGGCCCGTCGCCCCTCCTTTCCGTCTCCGACCTGTCCGTCGCCTTCCGCCAGGGGGCGGAGACCAA CCTGGCCGTCGACCGCGTCTCGTTCGACATTCATGCCGGCGAAACCGTTGCGTTGGTTGGCGAATCCGGCTCCGGCAAGT CGGTGTCGGCGCTCTCGATCCTGCGCCTGCTGCCCTATCCGGCGGCCTCGCACCCCTCCGGCGCCATCCATTTTAAGGGC ACGGAACTGCTCGGCGCGAGCGACCGGGAGATGCGCGCGGTGCGCGGCAACGAGATCTCGATGATCTTCCAGGAGCCGAT GACCTCGCTCAACCCGCTGCACTCGGTGGAGCGCCAGATCGCCGAAATCCTCAAGGTTCACAGGGGCATGAGCGATACCA AGGCGCGCGAGCGGGTGCTCGAGCTGCTGACCCAGGTCGGCATCCGCGAGCCAGGGACGCGGCTCGCCTCCTATCCGCAC CAGCTGTCCGGCGGCCAGCGCCAGCGCGTCATGATCGCCATGACGCTCGCCAACGAGCCGGACCTGCTGATCGCCGACGA ACCGACGACGGCGCTGGACGTCACCGTCCAGGCCCAGATCCTGAAGCTTCTCAAGGACTTGCAGAACCAGCGCGGCATGG CCATGCTGTTCATCACGCATGACCTCGGCATCGTGCGCAAGATCGCCGACCGGGTCTGCGTGATGACCGACGGCAGGATC GTCGAGCAGGGGCCGGTGGCGGATATCTTCGACCGGCCGCAGCATCCCTACACGCAGCACCTGCTGGCCGCCGAGCCGAA GGGCACGCCGCCGGTGCATGACGAGACCAAACCGATCGTCGTCGAGGCGCGCGACCTCAAGGTCTGGTTCCCGATCAAGC GCGGCCTGCTGCGCCGGACGGTCGACCACATCAAGGCGGTGGACGGCGTCGACGTCACCGTGCGCGAGGGCCAAACCCTT GGCATCGTTGGGGAAAGCGGATCCGGCAAGACCACGCTCGGACTCGCCATCCTGCGCATGATCTCCTCCACCGGGCGCAT CTCTTTCAAGGGCACTGAGATCGACGCCTATTCCTGGAAGGACATGCGGCCGCTGCGCGCGGACATGCAGATCGTGTTCC AGGATCCGTTCGGCGCCTTGAGCCCGAGGATGTCGGTGGCGGATATCGTCGGCGAGGGGCTGAAGGTGCATTTCCCGACC ATTTCGGAGGCGGAACGGGACCGCCGGGTGGCCATGGCGCTGGAGGAAGTCGGCCTCGACGCCACCACCCGGTTCCGCTA TCCGCACGAATTCTCCGGCGGCCAGCGCCAGCGCATCTCCATCGCGCGCGCCCTGGTGCTGGAGCCGAAATTCGTCATGC TGGACGAGCCGACCTCGGCGCTGGACATGAGCGTGCAGGCACAAGTCGTTGATCTGCTTCGCGATCTTCAGAAACGCCAC GGCCTCGCCTACCTGTTCATCTCGCACGACCTGAAGGTCGTGCGCGCGCTCGCCAACGACGTCATCGTCATGCGCAACGG CAAGGTGGTCGAGGCCGGCCTGGCAGCCGAAGTGTTCGACCGGCCGAAGACCGACTACACCCAGGCACTGATGGCTGCGG CGTTTCGGCTGGAAACCGCGCCGGAGGGTGTGGTCAGCGAATAG Protein sequence : MTVGSGPSPLLSVSDLSVAFRQGAETNLAVDRVSFDIHAGETVALVGESGSGKSVSALSILRLLPYPAASHPSGAIHFKG TELLGASDREMRAVRGNEISMIFQEPMTSLNPLHSVERQIAEILKVHRGMSDTKARERVLELLTQVGIREPGTRLASYPH QLSGGQRQRVMIAMTLANEPDLLIADEPTTALDVTVQAQILKLLKDLQNQRGMAMLFITHDLGIVRKIADRVCVMTDGRI VEQGPVADIFDRPQHPYTQHLLAAEPKGTPPVHDETKPIVVEARDLKVWFPIKRGLLRRTVDHIKAVDGVDVTVREGQTL GIVGESGSGKTTLGLAILRMISSTGRISFKGTEIDAYSWKDMRPLRADMQIVFQDPFGALSPRMSVADIVGEGLKVHFPT ISEAERDRRVAMALEEVGLDATTRFRYPHEFSGGQRQRISIARALVLEPKFVMLDEPTSALDMSVQAQVVDLLRDLQKRH GLAYLFISHDLKVVRALANDVIVMRNGKVVEAGLAAEVFDRPKTDYTQALMAAAFRLETAPEGVVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-91 | 46 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-91 | 46 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-91 | 46 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-91 | 46 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-97 | 43 |
