Gene Information

Name : SL003B_4113 (SL003B_4113)
Accession : YP_004305836.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Unknown
Product : transposase, IS66 Orf2 like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 4417137 - 4417493 bp
Length : 357 bp
Strand : +
Note : -

DNA sequence :
ATGATGTTCGGCCAGGGCGGGTCGGCGAAGGTCTTCGTGGCGACACGGCCGGTGGACTTCCGCAAGGGTATTGATGGCCT
GGCGCTGGCGGTGCAGGAGATGTTCGGGCTCGATCCGTTCTGTGGCGCGGTCTTCGTGTTCCGGTCGAAACGCGCGGACC
GGATCAAACTTCTGATATGGGATCAGACCGGGATGGTGCTTGTCCACAAGCGGCTGGAATGCGGCAAGTTCGTCTGGCCA
CAGGCGCAGGACGGGGTGATGCGGATATCCTCCGCCCAGATGGCGGCCTTGTTCGAAGGGCTGGACTGGCGGCTGGTCCG
GCCGGAGCGCGCGCGGCGCCCGCTGGTGGCGGGATGA

Protein sequence :
MMFGQGGSAKVFVATRPVDFRKGIDGLALAVQEMFGLDPFCGAVFVFRSKRADRIKLLIWDQTGMVLVHKRLECGKFVWP
QAQDGVMRISSAQMAALFEGLDWRLVRPERARRPLVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-18 44
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-14 43
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-14 43
unnamed AAC31493.1 L0014 Not tested LEE Protein 5e-15 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 5e-15 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-15 42
unnamed AAL99258.1 unknown Not tested LEE Protein 5e-15 42
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 7e-15 42
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 5e-15 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 7e-15 42
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 7e-15 42
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-15 42
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-15 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_4113 YP_004305836.1 transposase, IS66 Orf2 like protein VFG0792 Protein 2e-15 42
SL003B_4113 YP_004305836.1 transposase, IS66 Orf2 like protein VFG1698 Protein 1e-15 42
SL003B_4113 YP_004305836.1 transposase, IS66 Orf2 like protein VFG1709 Protein 2e-15 42