Gene Information

Name : istB (SL003B_4073)
Accession : YP_004305796.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Unknown
Product : IS20 family transposase IstB-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 4376093 - 4376863 bp
Length : 771 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACCCAAGCGTCAGACAATCCCCCTGCGATCCTGCTCTCCCACACGCTCAAGACCCTCAAGCTGCCGACCTTCCA
GCGCGAGTATCAGAAGCTGGCCCGGCTCTGCGCCACACAGGGCGTGGACCATGTCGGATACCTCACTCGGCTTGCTGAGC
AGGAGATGATCGAACGGGATCGCCGCAAGGTCGAACGCCGCATCAAGGCGGCGAGGTTCCCGGTCGTCAAAAGCCTCGAC
AGCTTCGACTTCGCCGCTATCCCGAAGCTCAACAAGATGCAGGTGCTGGAGCTGGCCCGCTGCGAATGGGTCGAGCGGCG
CGAGAACGTCATCGCGCTTGGCCCCAGCGGCACGGGCAAGACCCATGTGGCGCTCGGTCTCGGTCTGGCCGCCTGCCAGA
AGGGCTTGTCCGTCGGCTTCACGACCGCCGCTGCCCTGGTCAGCGAGATGATGGAGGCGCGCGACGAGCGACGTCTGCTG
CGTTTCCAGAAGCAGATGGCAGCCTACAAGCTCCTGATCATCGACGAACTGGGCTTCGTGCCATTGTCAAAGACCGGGGC
GGAATTGCTGTTCGAGCTGATCGCGCAACGCTACGAACGCGGTGCCACCCTGATCACCAGCAATCTGCCATTCGACGAAT
GGACCGAGACGCTGGGATCGGAACGGCTGACCGGCGCACTGCTCGACCGGCTGACCCACCACGTCAACATCCTCGAGATG
AACGGCGACAGCTATCGTCTCGCTCAAAGCCGCGCCCGAAGGGCAGGCTGA

Protein sequence :
MSTQASDNPPAILLSHTLKTLKLPTFQREYQKLARLCATQGVDHVGYLTRLAEQEMIERDRRKVERRIKAARFPVVKSLD
SFDFAAIPKLNKMQVLELARCEWVERRENVIALGPSGTGKTHVALGLGLAACQKGLSVGFTTAAALVSEMMEARDERRLL
RFQKQMAAYKLLIIDELGFVPLSKTGAELLFELIAQRYERGATLITSNLPFDEWTETLGSERLTGALLDRLTHHVNILEM
NGDSYRLAQSRARRAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_004305796.1 IS20 family transposase IstB-like protein VFG1460 Protein 6e-33 41