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Name : SL003B_3844 (SL003B_3844) Accession : YP_004305569.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : Spermidine/putrescine ABC transporter ATPase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 4165020 - 4166009 bp Length : 990 bp Strand : - Note : - DNA sequence : ATGCGATCTGCAGTAAGTTTCTCAAAAGTTTCAAGGCACTACGGCTCCGTCAAGGCCGTCGACGGGATCGATCTGGACAT CGAGGAGGGCGAATTCTTTGCCATGCTCGGCCCGTCCGGCTCGGGCAAGACGACCAGCCTGCGGCTGATCGCCGGTTTCG AGCAGCCGACGTCGGGCCATATCGAAATCTTCGGTGAGACCGCCGAGGGCGTGCCGCCGTACCGGCGCAACGTCAATACG GTGTTCCAGGACTATGCCCTTTTCCCGCACATGAACGTGCGCGACAACGTCGCCTACGGGCTGATGATCCGGGGGATTGC GAAGCGTGAGCGTCACGCGGCCGCCGAGCAAGCCCTTGAACTGGTTCGCCTTCCCGGCTACGGCGAGCGTCGCCCGAGCG CGTTGTCCGGAGGACAGAGGCAGCGCGTGGCGCTGGCTCGGGCACTGGTCAACAAGCCCAGGGTGCTGCTTCTCGACGAA CCGCTCGGCGCGCTCGACCTGAAGCTGCGCGAGCAGATGCAGGAAGAGCTCAAAGCCCTTCAAAAGACACTGAAAATCAC CTTCGTCTTCGTCACCCACGACCAGGGCGAGGCGCTGTCGATGGCCGACCGCATCGCCGTCTTCAACCATGGCCGGATCA TGCAGGTGGGCACGCCGCAGGAGATCTATCAACGCCCGAAGACCCGCTTCGTCGCTGATTTCGTTGGCTCTTCCAACGTC CTGTCCCCCACCTTCCTTGAGAGCCTCGGCCTGCCGCCGGCCTGGGCTAGCCTGCGTCCGGAAAAGGTCCGGATAGGCGC CGGAGAAGCGCTTGAAACCCGCCTGATCTCCGCCGGATTCCTGGGAGCCTCGACGCGTCTGGTGCTGCAGGCGGGCGATC AGCGCCTGACCGCCATCGTGCCGGCCGGCCAGCCGCTGCCCGAGGAGGGTGGCATCGTCCGCATCGGCTGGAACCCGGAC GACCTGCATCCGATGGAGGCGGAGGAATGA Protein sequence : MRSAVSFSKVSRHYGSVKAVDGIDLDIEEGEFFAMLGPSGSGKTTSLRLIAGFEQPTSGHIEIFGETAEGVPPYRRNVNT VFQDYALFPHMNVRDNVAYGLMIRGIAKRERHAAAEQALELVRLPGYGERRPSALSGGQRQRVALARALVNKPRVLLLDE PLGALDLKLREQMQEELKALQKTLKITFVFVTHDQGEALSMADRIAVFNHGRIMQVGTPQEIYQRPKTRFVADFVGSSNV LSPTFLESLGLPPAWASLRPEKVRIGAGEALETRLISAGFLGASTRLVLQAGDQRLTAIVPAGQPLPEEGGIVRIGWNPD DLHPMEAEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 3e-24 | 43 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-25 | 42 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-26 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SL003B_3844 | YP_004305569.1 | Spermidine/putrescine ABC transporter ATPase | VFG1206 | Protein | 1e-29 | 42 |
| SL003B_3844 | YP_004305569.1 | Spermidine/putrescine ABC transporter ATPase | VFG0344 | Protein | 3e-30 | 42 |
