Gene Information

Name : SL003B_3610 (SL003B_3610)
Accession : YP_004305336.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Virulence
Product : Invertase recombinase-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 3913281 - 3913880 bp
Length : 600 bp
Strand : +
Note : -

DNA sequence :
GTGCTGGTCGGCTATGCGCGGGTTTCGACGCACGACCAGAATCCGGCCCTTCAGCTCGACGCGCTGAAGCAGGCGGGCTG
CGGGCGCACCTTCATCGACAAGGCGAGCGGCGCACATCGGGAGCGCCCGGCCCTCATGTCGGCAATCGACTATCTACGGC
CGGGCGACACGCTCGTCGTCTGGAAGCTCGACCGCCTGGCCCGGTCGATGAAGCAGCTCATCGAAACGATCGAAGTCCTC
GAACGTCAGGGCGTCGGCTTCCGCTCCCTGACGGAAGCGATCGACACGACGACCGCCGGCGGCCGGCTGGTCTTCCATAT
CTTCGGGGCCTTGGCCGAGTTCGAGCGCGCGATGATCCTTGAGCGGACGCGCGCCGGCCTCGATGCCGCCAGAGCGCGAG
GACGGGGCGGCGGCCGCCCGCCAAAACTGACGGACGAGGATGTGGCCGCCGCGCGGACCATGCTCGCCGACAGCGACATC
TCAATCGAATATGTGGCGAAGCGATTCAATATCTCGCCGGCCACGCTCTACCGCTACCTGCCCGCTGCGCGCACGCAGGC
AGCGGCGGAGGATACGGCCGCCGATGATCGTGTATCTTGA

Protein sequence :
MLVGYARVSTHDQNPALQLDALKQAGCGRTFIDKASGAHRERPALMSAIDYLRPGDTLVVWKLDRLARSMKQLIETIEVL
ERQGVGFRSLTEAIDTTTAGGRLVFHIFGALAEFERAMILERTRAGLDAARARGRGGGRPPKLTDEDVAAARTMLADSDI
SIEYVAKRFNISPATLYRYLPAARTQAAAEDTAADDRVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-36 55
res AGK06966.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGK07012.1 resolvase Not tested SGI1 Protein 8e-36 54
res AAK02044.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGK07070.1 resolvase Not tested SGI1 Protein 8e-36 54
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 8e-36 54
res AGF34985.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGF35025.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGF35059.1 resolvase Not tested SGI1 Protein 8e-36 54
res AGK06929.1 resolvase Not tested SGI1 Protein 8e-36 54
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 3e-29 51
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 5e-29 51
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 5e-29 51
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-32 50
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 5e-33 50
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 5e-33 50
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 3e-19 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 4e-19 41
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 3e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_3610 YP_004305336.1 Invertase recombinase-like protein VFG1030 Protein 1e-19 41