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Name : SL003B_3201 (SL003B_3201) Accession : YP_004304927.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : TRAP-type C4-dicarboxylate transporter large permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 3445040 - 3446341 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGGAACTGCAAAGCGCGCTCACGCTGTTCGGCGTCTTCGGCCTGCTGATGGTGATCGGCGTGCCGATCGCCTTCGCCAT CGGCATTGCCGCCGTGCTGACCTTCATGCTGTTCATGACCTTCGACCAGTCGGTCTACATCACCGCGCAGCAGATGGCGT CGGGACTGGACAGCTTCACGCTGCTCGCCATCCCGTTCTTCATCCTGGCCGGCAACATCATGAACCGCGGCGGCATCGCG CTGCGCCTGATCGAGTTCGCCAAGGTGCTCGGCGGCCGCCTGCCCGGCTCGCTCGCCCACTGCAACGTGCTCGCCAACAT GATGTTCGGCTCGATCTCGGGGTCGGCGGTCGCCTCCGCGGCCGCGGTCGGCGGCGTCATGGCGCCGATGCAGAAGAAGG AAGGCTACGACCCGGCCTATTCGGCCGCCGTCAACATCTCCTCCTGCCCGACCGGGCTGCTCATCCCGCCCTCGACCACC TTCATCGTCTATTCGCTGATCACCAACGGCACGTCGATCGCGGCCCTGTTCGTCGCCGGCTACATCCCCGGCCTTCTGAT GGGCCTCGGCATCATGGCCATCGCGGGGGTCATCGCCAGGAAGCGCGGCTATCCGGTGTCGCCGCGGCCGTCGTGGCGCG AGGTCGTGCACAAGACCGCCGACGCGCTGCTGCCGCTCGGCCTGATCGTCGTCGTCATGGGCGGCATCATCGGCGGCGTG TTCACCGCGACCGAGGCCTCGGCGGTGGCGGTCGTCTACACGCTGTTCCTGGCGCTGGTGTGGTACCGCGAGATCGGTCT GAAGGACCTGCCGGCGATCATCCTGGAATCGGCGGTGACGACCTCGATCGTGCTGCTGATGATCGGCTGCTCCATCGCCA TGTCCAAGGTCATGGCCTTCGCCGACATCCCCTACACCATCTCCGACGCGCTGCTGGCGGTCTCGGACAATCCGCTGGTG CTGTTCCTGGTGATCAACATCGCGCTGCTGGTCGTCGGCACCTTCATGGACATGACGCCGGCGCTGCTGATCTTCACGCC GATCTTCCTGCCCGTCGTGCAGGACCTCGGCATGGATCCGGTCCACTTCGGCGTGATGATGACCTTCAACCTCTCCATCG GCATCTGCACACCACCGGTCGGCTCGGCGCTGTTTGTCGGCTGCTCGGTGGCCAAGGTGTCGATCGGCAACGTGCTCAGG CCGCTGTTGCCCTTCTACGCGGTCCTGGTCGTGCTGCTCCTCGCCGTCACCTACATCCCGGCGCTCAGCCTGACGCTGCC GCGCCTCGTCCTCGGCTACTGA Protein sequence : MELQSALTLFGVFGLLMVIGVPIAFAIGIAAVLTFMLFMTFDQSVYITAQQMASGLDSFTLLAIPFFILAGNIMNRGGIA LRLIEFAKVLGGRLPGSLAHCNVLANMMFGSISGSAVASAAAVGGVMAPMQKKEGYDPAYSAAVNISSCPTGLLIPPSTT FIVYSLITNGTSIAALFVAGYIPGLLMGLGIMAIAGVIARKRGYPVSPRPSWREVVHKTADALLPLGLIVVVMGGIIGGV FTATEASAVAVVYTLFLALVWYREIGLKDLPAIILESAVTTSIVLLMIGCSIAMSKVMAFADIPYTISDALLAVSDNPLV LFLVINIALLVVGTFMDMTPALLIFTPIFLPVVQDLGMDPVHFGVMMTFNLSIGICTPPVGSALFVGCSVAKVSIGNVLR PLLPFYAVLVVLLLAVTYIPALSLTLPRLVLGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 3e-49 | 42 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 4e-49 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 4e-49 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SL003B_3201 | YP_004304927.1 | TRAP-type C4-dicarboxylate transporter large permease | VFG1110 | Protein | 2e-49 | 42 |
