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Name : SL003B_3184 (SL003B_3184) Accession : YP_004304910.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : TRAP-type C4-dicarboxylate transport protein, permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 3427384 - 3428679 bp Length : 1296 bp Strand : - Note : - DNA sequence : ATGAGCCTGGAACTCGCCCTTTGTCTGGTCGCGCTGTTTGGTCTGGCCGCGATCGGCACGCCGATCGCCTATTCGATCAT TCTTGCCGCGATCGTCTACCTTGCGGCCGCCGGTCAGGACATCGCCCTCGCCGGCGAGCAGATCCTCCAGGGGCTTTACG AAAGCTTCGTGCTTCTCGCAGTGCCGCTGTTCATCGTCGCCGCGAACATCATGAATGCCGGCTCGATCTCCGAACGCCTG CTCAGGTTCTGCGTCGCGGCCGTGGGTCGCTTTCGGGGCGGGCTCGGCCATGTCAATGTCGTGGCATCGCTGATCTTTTC CGGCATGTCCGGCTCGGCCGTCGCCGACGCCGCCGGCATCGGCAAGATCGTCATCGGAATGATGACCCGTAGCGGCCAGT ATTCGCACGGCTATGCGGCCGCCATCACCGCCGCATCCGCCACCATCGGTCCGATCATCCCGCCGTCCATTCCGATGGTG CTCTATGCCCTCGTATCGAACAGTTCCATCGGCTACCTGTTCCTCGGTGGCATCGTTCCGGGCCTAATCATGGGGGGCGT CCTCATGGTCATGAACGCCTATCTGTCGGCGCGACGCGGCTTTGCCCTGGAACAGCCGGTGCCGCTGCGCGACCTGCCGG GCCACACCGTCAATGCCTTCCCGGCTCTCCTAATGCCGGCGATCCTGCTCTACGGCATCTACGGCGGGGTGACGACGCCG ACGGAGGCGGCCGCCGTGGCCGCCGCCTATGCCCTCCTCCTGGCCGGAGCGTTCTACCGCGCTCTCACCTTCGCGACGCT GTATCAGATCATGGTCGACAGCGCACGCTCCTCGGCCGCCGTCGGCCTGGTTATCGGCGGGGCCCTGATCCTCAACTATA TCGTCGCCTCGGAAAACATCCCGAACACACTAGCCGGTACGCTGGTCGGCCTCGACGTTTCGCCGCTGACCTTCCTGCTT GCCGTCAATCTGGTCCTGCTGGTGCTCGGATGCGTGCTCGACGCGACGACGATCATCCTGGTGATCATTCCGTTGTTCCT GCCGACGTGCCGAGAACTGGGCATCGACATGGTCCATTTCGGCGTCGTCGCCATCGTCAACTGCATGATCGGGCTGATCA CGCCGCCCTACGGCATCCTGCTCTTCGTCATCAATGCCGTGACGCAGATCCCGCTGCGCGAGATCATCGGCGAGATCTGG GCGTTCCTCGGGGTGCTCGTGCTGGCGCTGCTCGTGCTGATCCTGTTTCCCGGCGTCGTTCTTTGGCTTCCCCGCATGTT TGGATATCCCGGATGA Protein sequence : MSLELALCLVALFGLAAIGTPIAYSIILAAIVYLAAAGQDIALAGEQILQGLYESFVLLAVPLFIVAANIMNAGSISERL LRFCVAAVGRFRGGLGHVNVVASLIFSGMSGSAVADAAGIGKIVIGMMTRSGQYSHGYAAAITAASATIGPIIPPSIPMV LYALVSNSSIGYLFLGGIVPGLIMGGVLMVMNAYLSARRGFALEQPVPLRDLPGHTVNAFPALLMPAILLYGIYGGVTTP TEAAAVAAAYALLLAGAFYRALTFATLYQIMVDSARSSAAVGLVIGGALILNYIVASENIPNTLAGTLVGLDVSPLTFLL AVNLVLLVLGCVLDATTIILVIIPLFLPTCRELGIDMVHFGVVAIVNCMIGLITPPYGILLFVINAVTQIPLREIIGEIW AFLGVLVLALLVLILFPGVVLWLPRMFGYPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 9e-40 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 9e-40 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 7e-40 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SL003B_3184 | YP_004304910.1 | TRAP-type C4-dicarboxylate transport protein, permease | VFG1110 | Protein | 4e-40 | 42 |
