Name : SL003B_2913 (SL003B_2913) Accession : YP_004304640.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3143686 - 3144360 bp Length : 675 bp Strand : - Note : - DNA sequence : ATGCGCCTGCTTGTTGTCGAGGACGACGCCGATCTCAACCGCCAGCTAACCGAAGCCCTGACCGAGGCCGGCTATGTCGT CGACCGCGCCTTCGACGGCGAGGAGGGTCATTTCCTCGGCGACACGGAGCCCTATGACGCGGTCGTGCTTGACCTCGGCC TGCCCAAGCTCGACGGTCTGTCTGTGCTGGAGCGCTGGCGCCGAGACGGGCGCAAGATGCCGGTGCTGATCCTGACCGCG CGCGACCGCTGGTCGGACAAGGTCGCCGGCATCGATGCGGGCGCGGACGACTACGTCGCCAAGCCGTTCCACATGGAGGA GGTGCTGGCGCGCGTGCGCGCGCTGGTGCGCCGGGCGGCGGGGCACGCCTCCAACGAGATCGAATGCGGCCCCGTGCGCC TCGACCTGCGCGCCGGACGGGTGACCGTCGACGGCCATCCCATCAAGCTGACCTCGCACGAGTACCGGCTGCTCGCCTAC CTGATGCACCACAAGGGCAAGGTGATCTCGCGCACCGAACTGACCGAGCATCTCTACGACCAGGATTTCGACCGGGATTC GAACACGGTGGAGGTGTTCGTCGGGCGGCTGCGCAAGAAGCTCGGCGGCGAGCCGATCGAGACCATCCGCGGCCTCGGCT ACCGCATGGGGGACCCCGTTGAGGACCGAGGCTGA Protein sequence : MRLLVVEDDADLNRQLTEALTEAGYVVDRAFDGEEGHFLGDTEPYDAVVLDLGLPKLDGLSVLERWRRDGRKMPVLILTA RDRWSDKVAGIDAGADDYVAKPFHMEEVLARVRALVRRAAGHASNEIECGPVRLDLRAGRVTVDGHPIKLTSHEYRLLAY LMHHKGKVISRTELTEHLYDQDFDRDSNTVEVFVGRLRKKLGGEPIETIRGLGYRMGDPVEDRG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 9e-29 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | NC_002516.2.879194.p | Protein | 2e-41 | 49 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | CP000647.1.gene1136. | Protein | 1e-37 | 48 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | BAC0530 | Protein | 1e-37 | 48 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | CP001918.1.gene2526. | Protein | 1e-35 | 47 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | NC_002695.1.913289.p | Protein | 4e-36 | 46 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | CP000034.1.gene2022. | Protein | 1e-36 | 46 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | CP001138.1.gene1939. | Protein | 9e-37 | 46 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | CP004022.1.gene1005. | Protein | 6e-39 | 45 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | BAC0487 | Protein | 2e-31 | 45 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | BAC0197 | Protein | 4e-29 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | VFG0475 | Protein | 8e-37 | 46 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | VFG1390 | Protein | 2e-24 | 43 |
SL003B_2913 | YP_004304640.1 | response regulators consisting of a chemotaxis protein CheY domain and a winged-helix DNA-binding domain | VFG1389 | Protein | 2e-25 | 42 |