Gene Information

Name : istB (SL003B_2837)
Accession : YP_004304564.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Unknown
Product : IS20 family transposase IstB-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3048081 - 3048575 bp
Length : 495 bp
Strand : -
Note : -

DNA sequence :

ATGCAGGTGCTGGAGCTGGCCCGCTGCGAATGGGTCGAGCGGCGCGAGAACGTCATCGCGCTTGGCCCCAGCGGCACGGG
CAAGACCCATGTGGCGCTCGGTCTCGGTCTGGCCGCCTGCCAGAAGGGCTTGTCCGTCGGCTTCACGACCGCCGCTGCCC
TGGTCAGCGAGATGATGGAGGCGCGCGACGAGCGACGTCTGCTGCGTTTCCAGAAGCAGATGGCAGCCTACAAGCTCCTG
ATCATCGACGAACTGGGCTTCGTGCCATTGTCAAAGACCGGGGCGGAATTGCTGTTCGAGCTGATCGCGCAACGCTACGA
ACGCGGTGCCACCCTGATCACCAGCAATCTGCCATTCGACGAATGGACCGAGACGCTGGGATCGGAACGGCTGACCGGCG
CACTGCTCGACCGGCTGACCCACCACGTCAACATCCTCGAGATGAACGGCGACAGCTATCGTCTCGCTCAAAGCCGCGCC
CGAAGGGCAGGCTGA

Protein sequence :

MQVLELARCEWVERRENVIALGPSGTGKTHVALGLGLAACQKGLSVGFTTAAALVSEMMEARDERRLLRFQKQMAAYKLL
IIDELGFVPLSKTGAELLFELIAQRYERGATLITSNLPFDEWTETLGSERLTGALLDRLTHHVNILEMNGDSYRLAQSRA
RRAG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
y1094	CAD33719.1	ORF B protein	Not tested	PAI I 536	Protein	2e-28	45

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
istB	YP_004304564.1	IS20 family transposase IstB-like protein	VFG1460	Protein	9e-29	45