Gene Information

Name : SL003B_1502 (SL003B_1502)
Accession : YP_004303230.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Resistance
Product : ABC transporter permease/ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1611904 - 1612632 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence :
TTGCCGGCTTCAGCCGACCCGCACGAGGACGTGGCTCCACTGATCGCCTTCCGGTCGGTGAGCAAGGTCTATGGCGCCGG
CGAGACGGCCGTCCATGCCCTCGACGGCGTCGACCTGGCGATCGCGCGCGGCGAATTCGTCGCCATCATGGGCCCGTCCG
GCTCCGGCAAGTCGACGGCCATGAACATCCTCGGCTGCCTCGACACGCCGACCTCGGGCAGCTACCTGTTCGACGGCACG
GATGTCGGGGCACTGACACGCAATCAGCGCGCCCTGCTGCGGCGCCATTTCATCGGCTTCGTGTTCCAGGGCTTCAACCT
GCTCGCCCGCATCAGCGCCCTCGACAATGTCGAACTGCCGTTGATCTACCGCGGCCTGCCGGCGGGTGAGCGGCGTATGC
GTGCCCTGCTTGCGCTCGACCAGGTCGGCCTGTCCGGCCGCGAGACCCACACGCCGGCGGAACTCTCCGGCGGCCAGCAG
CAGCGTGTCGCCATCGCGCGCGCGATCGCCACCGATCCGGTGCTGCTGCTCGCCGACGAGCCGACCGGCAACCTCGACAC
GGCGCGCAGCCGCGAGATCATGGAACTGCTGGTGCGGCTCAACCGCGAGCGCGGCATCACCATCGCCATGGTCACCCACG
AGAAGGAAATGGCCGCCTTCGCAGGCCGCACGATCCAGTTCGTCGACGGCCGCGTGGCCAGCGACAGGCTCAACCAGGTG
GTCGCGTGA

Protein sequence :
MPASADPHEDVAPLIAFRSVSKVYGAGETAVHALDGVDLAIARGEFVAIMGPSGSGKSTAMNILGCLDTPTSGSYLFDGT
DVGALTRNQRALLRRHFIGFVFQGFNLLARISALDNVELPLIYRGLPAGERRMRALLALDQVGLSGRETHTPAELSGGQQ
QRVAIARAIATDPVLLLADEPTGNLDTARSREIMELLVRLNRERGITIAMVTHEKEMAAFAGRTIQFVDGRVASDRLNQV
VA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-26 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_1502 YP_004303230.1 ABC transporter permease/ATPase NC_012469.1.7686878. Protein 3e-47 54
SL003B_1502 YP_004303230.1 ABC transporter permease/ATPase NC_008702.1.4606598. Protein 4e-38 50
SL003B_1502 YP_004303230.1 ABC transporter permease/ATPase CP001581.1.gene798.p Protein 2e-33 47
SL003B_1502 YP_004303230.1 ABC transporter permease/ATPase CP001581.1.gene598.p Protein 4e-31 42