Gene Information

Name : SL003B_1469 (SL003B_1469)
Accession : YP_004303197.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Resistance
Product : DevA-like ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1572884 - 1573606 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGGATGCCCCGATCGCGGTCCGCGGCCTCAATCACTGGTTTGGCAGCGGCGAGGCGCGCAAGCAGGCGCTCTTCGACAT
CGATCTGACGATAGACCCGGGCGAACTGGTCGTGCTGCTGGGCGCGTCCGGCTCCGGCAAGACCACGCTGCTGACCCTCG
TCGGCTGCCTGCGGGAGGTGCAGGACGGCAGCGTCCTGCTGTTCGGCAACGAGCTGCGCGGCGCCCCGGAAGACCTGCTG
GTCGAAAGCCGCCGCCGGCTCGGCTTCATCTTCCAGGCCCACAACCTGCACGAAAGCCTGACCGCGCTGCAGAACGTGCG
CATGGGCCTGGAGGTGCATGGCCGCGCTGCCATGGCGCATTGGCGTCAGGCTGCCGCCCACATGCTCGGCCTCGTCGGGC
TCGGCGACCGCATGCACTACCTGCCCGCCAACCTGTCCGGCGGCCAGAAGCAGCGCGTGGCTGTCGCCCGCGCTCTGGTC
GGCAATCCGCAGGTCGTCTTCGCCGACGAGCCGACCGCTGCCCTGGACAAGGACAGCGGCCTGCAGGTGGTCCGCTTGCT
CAAGCGGTTGGGCGCGGAGCGCGGCACCACGACCCTGATGGTGACCCACGACAACCGCATCCTCGATCTCGCCGACCGCA
TCGTCACCATGGAAGATGGCCGGATCGTCCGCGACGAACGCTGCCGGGCAGGCCCTATTCCGCCTGCCGGATCTCCAGCC
TGA

Protein sequence :
MDAPIAVRGLNHWFGSGEARKQALFDIDLTIDPGELVVLLGASGSGKTTLLTLVGCLREVQDGSVLLFGNELRGAPEDLL
VESRRRLGFIFQAHNLHESLTALQNVRMGLEVHGRAAMAHWRQAAAHMLGLVGLGDRMHYLPANLSGGQKQRVAVARALV
GNPQVVFADEPTAALDKDSGLQVVRLLKRLGAERGTTTLMVTHDNRILDLADRIVTMEDGRIVRDERCRAGPIPPAGSPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_1469 YP_004303197.1 DevA-like ABC transporter ATPase NC_012469.1.7686878. Protein 1e-30 42