Gene Information

Name : SL003B_1420 (SL003B_1420)
Accession : YP_004303148.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1530817 - 1531587 bp
Length : 771 bp
Strand : +
Note : -

DNA sequence :
ATGACTGTCGTTGAGTCCCAAGCCCGGGGTGAGGTCACGATCCGTGACCTCACCAAGGCCTTCGCCATCAATGGCGAACC
GCTGACAGTGCTGAAAGGCATCGATCTGGAGATCCGTGGTGGCGAGAGCCTCGCCATTGTGGGCGCGAGCGGCTCGGGAA
AGACGACCTTGCTGCGGATTCTCGCGGGGTTGGAGAACCCCGATAAGGGTGGAGTTCTGATCGACGGTGCCCCCGTCCAC
GGTCTGGGCCGTGATCGGGCGGTGATCTTCCAGGAGCCGCGTCTGCTGCCATGGCTCACCGTACTCGGTAATGTCGCCTT
CGGATTGGAGGTGCAGGGCGTGCCGGCAATCGAGGCCAGGGAGCGCGCCCGGCGCTACATTCGCCTGGTCGGCCTTAGCG
AGTTCGAGAGCGCTTGGCCTCGGCAGCTTTCGGGCGGAATGGCTCAGCGGGTGGGCATCGCCCGTGCGTTGACCGTACAG
CCTGAGATCCTGCTGCTCGACGAACCGCTGGGAGCGCTCGATGCCATGACCAAAATCACTATGCAGGAGGAACTGTCCCG
CATTTGGGTCGAAGAAGGGGTTACCATGGTTCTCGTCACCCATGATCTCGAAGAAGCGATTTTTCTCGCGGACCGGGTTC
TAGTTCTACCCAAAACCAAGGGCGCTGCGATCCGCCTGATCGATATCGACCTGCCGCGCCCGCGCGATAGGAACGAGGCA
CGTTTCGTAACGTTCCGCCAGCAACTCATGGCCGAGTTCGGTTTGCACTGA

Protein sequence :
MTVVESQARGEVTIRDLTKAFAINGEPLTVLKGIDLEIRGGESLAIVGASGSGKTTLLRILAGLENPDKGGVLIDGAPVH
GLGRDRAVIFQEPRLLPWLTVLGNVAFGLEVQGVPAIEARERARRYIRLVGLSEFESAWPRQLSGGMAQRVGIARALTVQ
PEILLLDEPLGALDAMTKITMQEELSRIWVEEGVTMVLVTHDLEEAIFLADRVLVLPKTKGAAIRLIDIDLPRPRDRNEA
RFVTFRQQLMAEFGLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-48 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-24 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 41