|
Name : SL003B_1037 (SL003B_1037) Accession : YP_004302766.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Unknown Product : Succinate-semialdehyde dehydrogenase (NAD(P)+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1108951 - 1110402 bp Length : 1452 bp Strand : + Note : - DNA sequence : ATGAACAAGCCCGTCCTTTCTTCCGTCCCGACCGATCTCTACATCGACGGCGCGTTCCGTCCCGCCGCCGGCGGCGAGCG GTTCACGGTCTATAACCCGGCGAGCGAGGAGGTGCTGGCGGAGGTCGCCAGCGCCGGCATCGAGGACGCCGTGGCTGCGC TCGACGCCGCCGAACGCGCCGGCGCGGACTGGGCGAAGCGGTCGCCGCGCGAGCGCTGCGAGATCCTGCGCAAGGCGTTC GAGCTGTTCTCTGCGCGCAAGGAGGACTTCGCCCGGCTGATCACGCTGGAAAACGGCAAGGCGCGCTCCGACGCCATGGG CGAGGCGACCTATGCCGCCGAGTTCTTCCGCTGGTATTCCGAGGAAGGCGTGCGCAACATCGGCAGCCTGTCGACGGCGC CGGCGTCGGGCGCGCGCATCCTGGTGCAGCACAAGCCGGCCGGCATCGCCGTGCTGGTGACGCCGTGGAACTACCCGGCG GCGATGGGTACGCGCAAGCTCGCACCCGCGCTCGCCGCCGGCTGTCCCGTGATCATCAAGCCGGCCTCTGAAACGCCGCT GACCATGCTGGCGCTGATGCCGCTGCTGGAGGAGGCGGGCGTGCCGAAAGGCCTCGTCAACGTCATCCCGTCGCGTCGTT CGGGCGCGGTGGTCGACGCCCTGTTGCATGACCCGCGCGTGCGGGTGGTGTCGTTCACCGGCTCGACCGAGGTCGGGCGC AAGCTGTTGCGGAGCGCGGCCGACTGCGTCGTCAATCCGGCGATGGAACTGGGCGGCAACGCGCCGCTGATCGTGTTCGA GGACGCCGACATTGACACGGCGGTGGAGGGCTGCCTGCTCGCCAAGATGCGCAATCTCGGCGAAGCCTGCACGGCGGCCA ACCGCATCTACGTGCACGCGGCGGTCGAGGCGGCCTTCGTGGAAAGGTTCACCGCCAGGATGGCGAAGCTCAGGGTCGGC GACGGGCTCGATCCGTCGGTCGACGTCGGCCCGCTGGTCAATGCCGAGACACGCGACAAGGTCGCGGAACTGGTCGCCGA TGCCGTGGCAAAGGGGGCGACGGTGCGGTGCGGCGGCGCGGCGCCGCAAGGCCGCGGCTTCTTCTATCCGCCGACGGTGC TGACCGGCGTGCCGGACGACGCCGACCTGCTGCGCGAGGAGATCTTCGGCCCGGTCGCTGCGATCCAGACCTTCACCGAC GAGGACGAGATCGTCGCGCGGGCGAATTCCACCGAATATGGCCTGGTCGCCTATGTCTTCACGAAGGACCTCGGCCGCGG CCTGCGCGTCTCCGAACGCCTTGAGTTCGGCATGATCGGCCTCAACCGCGGCCTCGTCTCCGATCCCGCGGCTCCGTTCG GCGGCGTTAAGCAGTCGGGTCTCGGCCGCGAGGGCGCGCACGAGGGCCTGATGGAGTTCCTGGAAACCCAGTACATCTCG GTCGCCTGGTGA Protein sequence : MNKPVLSSVPTDLYIDGAFRPAAGGERFTVYNPASEEVLAEVASAGIEDAVAALDAAERAGADWAKRSPRERCEILRKAF ELFSARKEDFARLITLENGKARSDAMGEATYAAEFFRWYSEEGVRNIGSLSTAPASGARILVQHKPAGIAVLVTPWNYPA AMGTRKLAPALAAGCPVIIKPASETPLTMLALMPLLEEAGVPKGLVNVIPSRRSGAVVDALLHDPRVRVVSFTGSTEVGR KLLRSAADCVVNPAMELGGNAPLIVFEDADIDTAVEGCLLAKMRNLGEACTAANRIYVHAAVEAAFVERFTARMAKLRVG DGLDPSVDVGPLVNAETRDKVAELVADAVAKGATVRCGGAAPQGRGFFYPPTVLTGVPDDADLLREEIFGPVAAIQTFTD EDEIVARANSTEYGLVAYVFTKDLGRGLRVSERLEFGMIGLNRGLVSDPAAPFGGVKQSGLGREGAHEGLMEFLETQYIS VAW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-88 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-91 | 47 |
