Gene Information

Name : SL003B_1029 (SL003B_1029)
Accession : YP_004302758.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1099763 - 1100518 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGAGACTCAGCTACAGAACGGAGGCGCTTCGGCCGGCACGCAGCGGCGGCGCGCGGCGCTGTCGGCGCGCGGCCT
GACCAAGGTCTACGGCAGCGGCGATGTCGCGGTGTGGGCGCTGCGCGGCGTCGACCTCGACCTGTTCGAGGGCGAACTCG
CCGTGCTGATCGGGGCGTCGGGCAGCGGCAAGTCGACCCTGCTCAACATCATCGGCGGGCTGGACCGGCCGAGCGAGGGA
ACGGTGCGCTTCGAGGAGCACGATATCACCAACTTCGACGATGCCGAACTGACCCGGTTCCGCCGTGACCACGTCGGCTT
CGTGTTCCAGTTCTACAATCTGGTGCCGAGCCTGACGGCGGCGGAGAACGTCGCGCTGGTGACCGAGATCGCGCCCGACC
CGATGCGGCCGGAGGAGGCGCTGGAACTGGTCGGGCTGGGCGCGCGGCTCGACCATTTTCCGGCCCAGCTGTCGGGCGGC
GAACAGCAGCGGGTGGCAATCGCGCGGGCCATCGCCAAGCGGCCGCGCATCCTCCTGTGCGACGAGCCGACCGGCGCGCT
CGACAGCCAGACCGGCGTCGTCGTGCTGGAGGCGATCGAGACGATCAACCGCGACCTCGGCACCACGACGGCGCTGATCA
CCCACAACGTCGGTATCTCGGCGATGGCCGACCGGGTCGTCCGTCTCGCCGACGGGCGGATCGTCGAGACCACTGTCAAC
CGCGACAAGGTCGCGGCCAGCCTGATCCAGTGGTGA

Protein sequence : 
MTETQLQNGGASAGTQRRRAALSARGLTKVYGSGDVAVWALRGVDLDLFEGELAVLIGASGSGKSTLLNIIGGLDRPSEG
TVRFEEHDITNFDDAELTRFRRDHVGFVFQFYNLVPSLTAAENVALVTEIAPDPMRPEEALELVGLGARLDHFPAQLSGG
EQQRVAIARAIAKRPRILLCDEPTGALDSQTGVVVLEAIETINRDLGTTTALITHNVGISAMADRVVRLADGRIVETTVN
RDKVAASLIQW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_1029 YP_004302758.1 ABC transporter ATPase NC_012469.1.7685735. Protein 4e-45 50
SL003B_1029 YP_004302758.1 ABC transporter ATPase NC_008702.1.4606598. Protein 3e-28 48
SL003B_1029 YP_004302758.1 ABC transporter ATPase CP001581.1.gene798.p Protein 1e-33 43
SL003B_1029 YP_004302758.1 ABC transporter ATPase CP001581.1.gene598.p Protein 3e-34 41