Gene Information

Name : YE105_C0884 (YE105_C0884)
Accession : YP_004297083.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1047834 - 1048733 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
ATGCAACAGCAAAATAACCCGCTGATTGAACAGTTTCTTGATGCCCTGTGGCTGGAGCGGAATCTGGCAGAGAATACACT
GGCATCATATCGTTTGGATTTACATGCGCTGAGCGGATGGTTAGAGCATCACGACAGTGATTTATTGCGCGCCGGTTCGC
AGGACTTGCAGTCTTTCCTTGCCGAGCGCATTGAGGGCGGTTATAAATCCACCAGTTCAGCCCGGCTGCTCAGTGCGATG
CGCCGATTGTTCCAATATTTATACCGCGAAAAATTACGCGAAGATGACCCGACAGCGCTACTGTCATCACCCAAATTACC
GCAGCGCTTACCAAAAGATTTAAGCGAGGCGCAGGTTGACGCATTACTTAACTCCCCCAATGTCGATATCCCGCTAGAAT
TGCGCGACAAAGCGATGCTGGAAGTCCTCTATGCCACTGGTCTGCGGGTGTCTGAGCTGGTTGGGTTGACCATCAGCGAT
GTGAGTTTGCGCCAAGGGGTAGTGCGAGTTATCGGTAAAGGAAATAAAGAGCGCCTGGTGCCATTGGGTGAAGAGGCGGT
GTACTGGATCGAGAATTACATGGAGTATGGCCGCCCGTGGCTCATCAACGGCCAGTCTCTGGATGTGCTATTCCCGAGCA
ACCGCAGCCAGCAAATGACGAGACAGACTTTCTGGCATCGAATCAAACACTATGCGATCCTTGCCGGTATTGATAGTGAA
CGGCTTTCGCCCCACGTATTGCGGCATGCTTTTGCCACGCATCTGTTAAATCACGGTGCGGACCTGCGTGTGGTACAAAT
GTTACTGGGCCACAGTGATCTGTCGACGACTCAGATTTATACCCATGTAGCAACTGAGCGTTTGAAGTTGCTACATCAAC
AGCATCATCCGCGCGCATAA

Protein sequence :
MQQQNNPLIEQFLDALWLERNLAENTLASYRLDLHALSGWLEHHDSDLLRAGSQDLQSFLAERIEGGYKSTSSARLLSAM
RRLFQYLYREKLREDDPTALLSSPKLPQRLPKDLSEAQVDALLNSPNVDIPLELRDKAMLEVLYATGLRVSELVGLTISD
VSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYMEYGRPWLINGQSLDVLFPSNRSQQMTRQTFWHRIKHYAILAGIDSE
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKLLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-60 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-60 56