Gene Information

Name : YE105_C0844 (YE105_C0844)
Accession : YP_004297043.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 998798 - 999592 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
TTGGACCAACAGGCAAGCCAATCCAGCGTATTCTCACTTCACGAGCTGAGCTTTTCGGTTCCTGGCCGAACCTTATTGCA
ACCTTTGTCACTGACATTTCCACAAGGGAAAGTTTGCGGGCTGATTGGTCATAATGGTTCCGGTAAATCGACGCTTTTAA
AAATGCTGGGTCGCCATCAACCGCCTTCCAGTGGCAAGGTGTTGCTCAATGATGTGCCATTACCGCTGTGGGACAACAAG
GCTTTTGCCCGCGAAGTCGCTTACTTGCCGCAGCAATTACCGGCAGCTGAAGGGATGACCGTGCGCGAACTGGTCGCGAT
TGGTCGTTATCCGTGGCATGGTGCGCTGGGGCGTTTTCGTCAGGAAGACCGCGAACAGGTGGAAGAAGCGATTGCGCTAG
TGGATTTAAAACCTCTGGCGAATCGGTTGGTCGACAGCTTATCCGGTGGTGAACGCCAACGCGCCTGGCTGGCGATGTTG
GTGGCGCAAAATAGCCGATGCCTGCTGCTTGATGAGCCGACCTCGGCACTCGATATCGCACATCAGATTGAGGTGCTGGG
GCTGATTCAGCGCCTTAGTCGCGAGCGTGGCCTGACAGTTATTGCGGTATTACACGATATCAATATGGCGGCCCGTTATT
GCGACCATTTGGTAGCGCTACGTGGTGGTGAGATGATAGCGCAAGGCCCTGCTGACAGCCTGATGCAAGGTGCTGTTCTG
GAACAGATTTACGGTATTCCTATGGGAATATTACCCCATCCGGCCGGTGGTGCGCCGGTAAGTTTCGTGTATTAA

Protein sequence : 
MDQQASQSSVFSLHELSFSVPGRTLLQPLSLTFPQGKVCGLIGHNGSGKSTLLKMLGRHQPPSSGKVLLNDVPLPLWDNK
AFAREVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFRQEDREQVEEAIALVDLKPLANRLVDSLSGGERQRAWLAML
VAQNSRCLLLDEPTSALDIAHQIEVLGLIQRLSRERGLTVIAVLHDINMAARYCDHLVALRGGEMIAQGPADSLMQGAVL
EQIYGIPMGILPHPAGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-44 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-45 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-38 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-38 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-38 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-38 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C0844 YP_004297043.1 iron-hydroxamate transporter ATP-binding subunit BAC0164 Protein 2e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C0844 YP_004297043.1 iron-hydroxamate transporter ATP-binding subunit VFG0925 Protein 8e-45 44
YE105_C0844 YP_004297043.1 iron-hydroxamate transporter ATP-binding subunit VFG1042 Protein 2e-44 43