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Name : YE105_C0729 (YE105_C0729) Accession : YP_004296928.1 Strain : Yersinia enterocolitica 105.5R(r) Genome accession: NC_015224 Putative virulence/resistance : Virulence Product : fimbrial outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 865137 - 867677 bp Length : 2541 bp Strand : - Note : - DNA sequence : ATGGTATCCGCTCGTTCTACCATCTCCGGTTTTGCCCGTCGTGATTTATTGCGAATTTTGATTGTAGTTGCATTAAGTGG CAATGCTTATGGTGTGTTGGCCAGCGATGATATTCAGTTTAATACCGATGTATTGGATACCAAGGATCGCGCTAATTTTG ACCTCAGCCAGTTCTCCCAACGCGGCTACATCATGCCTGGGAATTATAACTTGTTGGTTAGCATGAATAAGCAGGAGCTT AGTGAACAGCCGATTGTGTTCTACGCCTCAGAAAAAGATGCAAAAAAAAGTGAGGCGTGTTTAACACCCCAGTTAATCGA GTTGTTGGCATTGAAAGAGGATAGCTTCAAAAAGCTGACCTGGTCGCGTGATGGGGAGTGTCTGGATATTAGCAGCTTAC CCGGCTTGACCGTGGAAGGTGATTTGGCAAAGTCATCGCTGTACTTGAGTGTGCCACAAGCCTGGCTGGAATACAGCGAA CCGGATTGGGATCCTCCTTCTCGCTGGGAGGAGGGTATTTCCGGTGTGCTGTTCGATTACAACTTGTTAGGGCAATTGAA CCGCCAGGAAACGAATAATACCAATAACAATACGTTAAGCGGCAACGGGACCACTGGCGCGAATCTGGGTGCCTGGAGAT TCCGTGCTGACTGGCAGATGCGTGTCGACCAATCATCGGGTTCATCGACTGAGCGCCAATGGGATTGGAGCCGTTATTAC GCTTATCGCGCTATCCCGAGTCTGGGAGCAAAGTTGACGTTGGGGGAAGATTTTTTGAATTCCTCCATCTTTGACAGTTT CCGCTTTAACGGCGCTAGCCTGGCGACGGATGACAATATGTTACCGCCAAATTTACGTGGTTATGCCCCTGAAATTACAG GAGTTGCCCGTACCAATGCACGGGTAGTTGTCAGTCAGCAAGGGCGTGTGTTGAGTGAAACGCTGGTTGCTGCCGGCCCT TTTCGTATTCAGAACTTGAACAGTTTTGTCTCTGGGACGCTGGATGTGCGGGTAGAGGAACTTGACGGGCAAGTTCAACA ATTTCAAGTAAATACCGCCAGTATTCCTTACCTGACCCGCCCCGGAATGGTGCGTTACCGTATCGCTGCCGGTAAGCCTT CGGATATCGGGCATCGGGCGGAAGGGCCAGTATTTGGCACCGGGGAATTCTCCTGGGGGATCAACAGTGGCTGGTCACTG TTTGGTGGCGCGATGAGCGGTGAAAACGAATATCAAGCGGCATCTATGGGGATTGGCCGTGACTTGATGGAATTTGGTGC GGTGTCGGTTGATATGACCCAATCATGGGCAACTTTACCCGAGCAAGGCACTTTGAGCGGTGGCTCTTATCGAGTCAACT ATTCGAAAAACTTTCAGGAAACAGGCAGTCAGGTGACGTTTGCTGGCTATCGCTTCTCTGAACGTAATTTTATGAGCATG AGTGAATATCTCGACGCGCGTTATCGCAACAATGACGTGGGTGGCAATAAAGAGATGTACACCATCAGCTTCAATCAACA ATTTCAGGATCTGGGGCTGAGTGCGTATCTGAACTATAGCCATCAGACCTATTGGGATCGCTCGGCGAATGACCGCTATA ACCTGGCTCTCTCGCGTTATTTTGATATCGGTAAAGTGAAAAATGTCAGTTTGACCTTCTCTGCTTACCGTAACCGCTAT AACGAAAGCAATGACGATGGCGTGTATTTGTCTATGTCGATGCCATTTGGTAACAGCGCAACCATCAGTTATAGCGCGAC GGTGAGTGGCAGTGAACATAGTCAGCGAGTGGGCTATACCGATCGTCTGGATGCTCACAATAACTACCAGATCAATACCG GGGTAGCACGTAGCGGCGTATTAGTGAGTGGTAACTACAACCACATAGGTAATAGTGCGGATATTAACGCCAATGCCAGT TATCAGGAGGGGCAATACTCTTCCGTTGGTTTAGGTATTCAGGGCGGCGCAACTATCACGGCTGAAGGTGGTGCTCTACA TCGGGTGAATACCCTCGGCGGTACCCGATTGTTACTGGATACTCAAGGTGTATCTGGCGTTCCGGTTCAGGGATATGGCT CATCAATACGCACCAACCAGTTTGGTAAAGCGGTAGTCGGTGATGTGAATAGCTATTACCGCAATCGGGCCAGTATTGAT ATCGATAACCTGGCTGATGATGTTGAAGCCAGAGGAACCGTAGCACAGGTCACACTGACCGAAGGTGCTATTGGTTATCG CCGCTTTAATGTGATTTCCGGTGAAAAGGCGATGGCGATGATACGTATGGCAGATGCTACATCACCGCCATTTGGGGCCA CCGTATTAAATGAAAATCAGCAAGAGACCGGCATTGTTAACGACGATGGTTCCACTTACCTCAGTGGGATCAAAGCTGGC GAAACCATGTCAGTACGTTGGAATGGTGAGGCACAATGCAGCATTACCTTACCGAAGGCTCTTTCTCCAGCAATACTGGC GAATCTACTGTTGCCTTGCCAGCCAATAGCCACGGGGGATAAACCTGCGGTATCACAGTAG Protein sequence : MVSARSTISGFARRDLLRILIVVALSGNAYGVLASDDIQFNTDVLDTKDRANFDLSQFSQRGYIMPGNYNLLVSMNKQEL SEQPIVFYASEKDAKKSEACLTPQLIELLALKEDSFKKLTWSRDGECLDISSLPGLTVEGDLAKSSLYLSVPQAWLEYSE PDWDPPSRWEEGISGVLFDYNLLGQLNRQETNNTNNNTLSGNGTTGANLGAWRFRADWQMRVDQSSGSSTERQWDWSRYY AYRAIPSLGAKLTLGEDFLNSSIFDSFRFNGASLATDDNMLPPNLRGYAPEITGVARTNARVVVSQQGRVLSETLVAAGP FRIQNLNSFVSGTLDVRVEELDGQVQQFQVNTASIPYLTRPGMVRYRIAAGKPSDIGHRAEGPVFGTGEFSWGINSGWSL FGGAMSGENEYQAASMGIGRDLMEFGAVSVDMTQSWATLPEQGTLSGGSYRVNYSKNFQETGSQVTFAGYRFSERNFMSM SEYLDARYRNNDVGGNKEMYTISFNQQFQDLGLSAYLNYSHQTYWDRSANDRYNLALSRYFDIGKVKNVSLTFSAYRNRY NESNDDGVYLSMSMPFGNSATISYSATVSGSEHSQRVGYTDRLDAHNNYQINTGVARSGVLVSGNYNHIGNSADINANAS YQEGQYSSVGLGIQGGATITAEGGALHRVNTLGGTRLLLDTQGVSGVPVQGYGSSIRTNQFGKAVVGDVNSYYRNRASID IDNLADDVEARGTVAQVTLTEGAIGYRRFNVISGEKAMAMIRMADATSPPFGATVLNENQQETGIVNDDGSTYLSGIKAG ETMSVRWNGEAQCSITLPKALSPAILANLLLPCQPIATGDKPAVSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 8e-167 | 47 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-165 | 47 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 1e-165 | 47 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-166 | 47 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-166 | 47 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-166 | 47 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 6e-175 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YE105_C0729 | YP_004296928.1 | fimbrial outer membrane usher protein | VFG1548 | Protein | 5e-167 | 47 |
| YE105_C0729 | YP_004296928.1 | fimbrial outer membrane usher protein | VFG0884 | Protein | 8e-167 | 47 |
| YE105_C0729 | YP_004296928.1 | fimbrial outer membrane usher protein | VFG0895 | Protein | 6e-167 | 47 |
