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Name : YE105_C0549 (YE105_C0549) Accession : YP_004296750.1 Strain : Yersinia enterocolitica 105.5R(r) Genome accession: NC_015224 Putative virulence/resistance : Resistance Product : putative multi-drug efflux protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 643944 - 647030 bp Length : 3087 bp Strand : + Note : - DNA sequence : ATGAAGCTGCTTGATAATTATATCAATAATAGTACCCGTATCTGGTTAACGATTCTGTTGCTGGGTGTTGGGGGTATTAT TGCCTATCTCAATATAGGCAGGCTGGAAGACCCGGCCTTTACCATCAAAACGGCAGTAGTTGTCACCCGCTATGATGGCG CGTCGGCACAACAGGTTGAAGAAGAAGTCACGTTGCCGCTGGAGAATGCCATTCAGGAACTCTCTTATGTCGATGATGTT ACCTCCATTTCCAGTGCGGGCTTATCGCAAATTACCATCAATATTCGTGCGCAATATGGGGCGAATGAATTACCGCAAAT CTGGGATGAATTGCGGCGTAAGATAAATGATAACAGTGTGCGGTTGCCACCGGGTGCCAGTGCGCCGATGGTCAACGACG ACTTCGGCGATGTGTATGGTTTCTTCTTCTCACTCACCGGTGATGGCTACAGTAATCAGGATTTACGCAACTTTGCCGAG CAATTACGGCGTGAGTTGGTACTGGTGCCGGGGGTCGGTAAAGTGGGGATTGTCGGTATCTTGCCTGAAGAAGTTCAGGT AGAGATTTCTCGTGCCCAGATGACCGCCGCAGGTATTACGCCACAACAATTATCCGACTTACTTGCTCGTCAGAATGTGG TGTCCGATGCCGGCCAACTACAGGTGGGTAGTGAGTCGATTCGTTTGCATCCAACCGGTGAATTCCAGAGTGTACAAGAG CTGGGGAACTTATTGGTTAGTCAGCCCGGCAGCCCGAAAAGTGTCTATTTACGCGATATCGCGACCGTGACACAAGGTTT TGGTCATTCACCGACAAATATTTACCGTGCTAATGGTAAGCCTGCGTTGGCGCTAGGGATCTCATTCGCCCCGAATGTCA ATGTAGTGAATGTGGGTAATGCCATTAAAGCTCGGCTGGCGCAGTTGGAAGGCGAGCGCCCGTCAGGCATGCATATCAAT GTGTTTTATGACCAGTCCCATGAAGTTGAGGGGGCGGTCAACGGCTTTATCCTTAACTTCCTGCTGGCACTGCTCATTGT TGTTGTCACGCTACTTATCTTTATGGGGGTACGCAGCGGTGTGGTGATTGCCATCTCGCTGGCACTGAACGTACTTGGCA CCTTGCTCATTATGTGGCTGTTTAATATCGAGCTACAGCGAGTGTCGCTAGGGGCGCTAATTATCGCGCTAAGTATGTTG GTGGATAACGCCATTGTAGTGGTGGAGGGGATTGTGGTGGGCCGCCAGCGCGGCGAAAGTCTCTCTACGGCGATCGGCAA TGTGGTGAAGCGCTCGATGATGCCGCTGTTAGGCGCGACAGTGATTGCCATTTTGGCCTTTGCCCCGATTGGCCTGTCCA ACGATGCAACCGGTGAATATTGTAAATCGCTATTCCAAGTGTTGTTAATCTCGTTGATGTTGAGCTGGATTACCGCGCTG ACATTGACACCGGTGTTTTCTAAGTGGGCATTCCAGAATCAAAAACCGGCGAAGGTGGATGAGGATAAACCGGCTAAGCA ACCTTATGATGGCTGGTTGTTCCGCTATTATCGTGTGGTGCTGAATAAATTACTGCAATACCGTGCAGTCACTTTGGTGC TGCTGGCGGCCATGTTAGTGGCGTCGGTGGTGGGCTTTGGCAATGTTCGCCAGAGCTTCTTCCCACCGTCAAACACGCCC ATTTTCTTTGTTGATATTTGGCTGCCGAATGGCACTGATATCAGTTATACCGAAGGGGTGGCGAGTAAGGTCGAGCAATA TATCAAACAGCAAAAAGGGGTGGCTGACACTATGGCGACCATAGGTCAGGGCGCGATGCGCTTTATGCTGACTTATAACG CCCAGCGTCATTATCCTAACTATGCGCAGGTGATGGTTCGAACCGAGCAGCTAGACCAAATCCCAGGTTTGATTGATGAA ATTGAAGCCTACATGCATGACGAATACCCGCAAGTTGATGCGCAGATAAAACGTATTATGTTCGGGCCGTCAAACAACAG CTCGATTGAAGCCCGCTTTATTGGCCCTGATCCCGAGGTATTACGCAGTTTGGCCGCACAGGCGGAAAAAGCGATTATTG CTGATCCGATGGCCGATGGCGCACGGCATGACTGGCAAGATCGCAGCAAAATGATTCGGCCACAATTCTCTGATTATCTC GGCCGCGAGCTGGGGGTGGATAAACGTGAGGTTGACGGCACCTTGCGCATGAGTTTTGGTGGCTTGCCGGTTGGCTTATA CCGCGATGGCACCCGCCTGATGCCGATTGTGTTGCGCACGCCAGATTCCGAGCGGCTCAATGCTGAACGACTCAATGATG TGATGGTGTGGAGTCAGGCACGCCAGGCCTTTATCCCTATCGATAACGTCGTGACCAGTTTTGAGACCGAGTGGGAAGAT CCACTTATCATGCGGCTGGATCGCAAACGGACATTGACGGTGCAAACTGATCCAACTCAGCAAGGGGGCGAAACCTCGGC TGAGTTATTACAGCGCATCAAGCCAGGGGTTGAGTCTATTCAATTGCCGCGCGGCTATGAACTTGAATGGGGCGGTGACT ACGAAAGTACCAAAGAAGCACAACGGGGTATTTTCATCAGTTTGCCGATAGCATTCCTGATTATGTTTGTGGTGACCGTC TTGATGTTTAGCTCGGTGCGTAACGCGCTCGCTATCTGGCTGACGGTGCCATTAGCACTGATTGGTGTGACTGTGGGCTT CTTGCTCACCGGTATTCCATTTGGTTTTATGGCCTTACTGGGGCTATTGAGTCTGAGTGGGATGTTGATACGTAATGGCA TTGTGCTGGTGGAAGAAATTGGCCTCCAGCGGCAGGAAAAACCACTGCGTGATGCCATTATTGATGCTTCCACTGCGCGT TTACGCCCTATCATGTTAACTGCATTTACCACGGTTTTGGGGCTAGCCCCGCTGCTCAGCGATGCTTTCTTCCAGAGTAT GGCGGTGGTGATTATGTTTGGTCTGGGCTTTGCAACTGTACTGACCCTACTGGTGTTGCCAGTGATATATAGCTGTATGA ATCCGGAACCAAAAGAGAAGGCGCATGATGAGCCAGTTAGTGAATAA Protein sequence : MKLLDNYINNSTRIWLTILLLGVGGIIAYLNIGRLEDPAFTIKTAVVVTRYDGASAQQVEEEVTLPLENAIQELSYVDDV TSISSAGLSQITINIRAQYGANELPQIWDELRRKINDNSVRLPPGASAPMVNDDFGDVYGFFFSLTGDGYSNQDLRNFAE QLRRELVLVPGVGKVGIVGILPEEVQVEISRAQMTAAGITPQQLSDLLARQNVVSDAGQLQVGSESIRLHPTGEFQSVQE LGNLLVSQPGSPKSVYLRDIATVTQGFGHSPTNIYRANGKPALALGISFAPNVNVVNVGNAIKARLAQLEGERPSGMHIN VFYDQSHEVEGAVNGFILNFLLALLIVVVTLLIFMGVRSGVVIAISLALNVLGTLLIMWLFNIELQRVSLGALIIALSML VDNAIVVVEGIVVGRQRGESLSTAIGNVVKRSMMPLLGATVIAILAFAPIGLSNDATGEYCKSLFQVLLISLMLSWITAL TLTPVFSKWAFQNQKPAKVDEDKPAKQPYDGWLFRYYRVVLNKLLQYRAVTLVLLAAMLVASVVGFGNVRQSFFPPSNTP IFFVDIWLPNGTDISYTEGVASKVEQYIKQQKGVADTMATIGQGAMRFMLTYNAQRHYPNYAQVMVRTEQLDQIPGLIDE IEAYMHDEYPQVDAQIKRIMFGPSNNSSIEARFIGPDPEVLRSLAAQAEKAIIADPMADGARHDWQDRSKMIRPQFSDYL GRELGVDKREVDGTLRMSFGGLPVGLYRDGTRLMPIVLRTPDSERLNAERLNDVMVWSQARQAFIPIDNVVTSFETEWED PLIMRLDRKRTLTVQTDPTQQGGETSAELLQRIKPGVESIQLPRGYELEWGGDYESTKEAQRGIFISLPIAFLIMFVVTV LMFSSVRNALAIWLTVPLALIGVTVGFLLTGIPFGFMALLGLLSLSGMLIRNGIVLVEEIGLQRQEKPLRDAIIDASTAR LRPIMLTAFTTVLGLAPLLSDAFFQSMAVVIMFGLGFATVLTLLVLPVIYSCMNPEPKEKAHDEPVSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 1e-171 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YE105_C0549 | YP_004296750.1 | putative multi-drug efflux protein | BAC0428 | Protein | 0.0 | 51 |
| YE105_C0549 | YP_004296750.1 | putative multi-drug efflux protein | BAC0519 | Protein | 0.0 | 50 |
| YE105_C0549 | YP_004296750.1 | putative multi-drug efflux protein | BAC0526 | Protein | 0.0 | 48 |
| YE105_C0549 | YP_004296750.1 | putative multi-drug efflux protein | BAC0425 | Protein | 7e-172 | 41 |
