Gene Information

Name : YE105_C3852 (YE105_C3852)
Accession : YP_004300049.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4447706 - 4448473 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGGCAAACCTTAATAACGTTATCCTGATACGGGTAAACCGACAGCGGAATAATACTCTGGTAGGAACAGCTTTGTTGTT
TGTTACGATGATGAGTGAGGCGTCAATATCTCTGGATAGAACGCGGATTATTTTCAATAGTGCCGATACGTCAGCTAGTG
TCATTTTGCAAAATAAAAGCGAGGTATTGCCTTATCTGGCGCAATCCTGGTTGGAAAATGCCGCTGGGCAGAAAGTAGAT
AGCCCCTTGTCTGCTTTACCCGCGATAACACGAATTGATGTGGGTCAGAAAAGCCTGGTGAGAATTATTTCACTGCCAGA
TATCGAGCAATTAGCCGCTGATCGTGAAACTTTATTCTATTTTAATGTGCGGGAAATTCCCCCGAAAAGTGAAATAACCG
CAGTAGTGCAAATCGCTATCCAAAATAAAATAAAGTTATTTTATCGGCCAGCGGCAATTAAAGCGGATTATAAGAATGTC
TGGCAGGAGAAGTTACAGATCAGGCAGCAAGGAGAAGAGCTTAGAATTCATAACCCCACGCCGTATTACGTCACGTTAGG
GCATTTAAATCGGGATAATCGCGGTAATTTTCCCGGTTTTGACAGTGTTATGATTGCGCCATTCGGTACTGAGTCCGTTA
AGACTCCCGGGTATAATGGCAATGGCTATAGTCTCGGCTATATGGATGATTTTGGTCAGATGATCATTCGCAGCGTGAAC
TGCTCGATAGGCCATTGCCGCATTCAGGCTGTGGAAAAGAAGATATAA

Protein sequence :
MANLNNVILIRVNRQRNNTLVGTALLFVTMMSEASISLDRTRIIFNSADTSASVILQNKSEVLPYLAQSWLENAAGQKVD
SPLSALPAITRIDVGQKSLVRIISLPDIEQLAADRETLFYFNVREIPPKSEITAVVQIAIQNKIKLFYRPAAIKADYKNV
WQEKLQIRQQGEELRIHNPTPYYVTLGHLNRDNRGNFPGFDSVMIAPFGTESVKTPGYNGNGYSLGYMDDFGQMIIRSVN
CSIGHCRIQAVEKKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-41 45
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 2e-48 43
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-50 43
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-50 42
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-50 42
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 2e-50 42
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-50 42
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-50 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C3852 YP_004300049.1 putative fimbrial chaperone VFG0885 Protein 7e-42 45
YE105_C3852 YP_004300049.1 putative fimbrial chaperone VFG1547 Protein 7e-51 43
YE105_C3852 YP_004300049.1 putative fimbrial chaperone VFG0896 Protein 9e-51 42