|
Name : YE105_C3850 (YE105_C3850) Accession : YP_004300047.1 Strain : Yersinia enterocolitica 105.5R(r) Genome accession: NC_015224 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 4444682 - 4446001 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGTCATCTTATTTTGATAAATTAGAACAAGTGCGTTACGAAGGCAGCCAGAGCTTTAACCCACTGGCATTTCATCACTA CAATCCGGATGAAATTATCCTTGGTAAGCGAATGGCCGATCACCTAAGGTTCGCTGCCTGCTACTGGCATACCTTCTGCT GGGGCGGGGCGGATATGTTTGGCAGCAATGCCTTTGAGCGCCCATGGCAACAATCTGGAGATGCATTGGCTTTGGCAAAA AGTAAAGCTGATGTGGCTTTTGAATTCTTCCATAAACTGAATGTGCCTTATTACTGCTTCCACGATGTGGATGTTTCACC CGAAGGCACATCATTAAAAGAATATTTAAATAATTTTGCCGTCATGACTGATGTATTAGCTGAGAAGCAAGAAAGTAGCG GCGTAAAATTATTATGGGGCACCGCCAACTGCTTCACCCACCCGCGCTACGGTGCCGGGGCGGCGACCAATCCAAATCCA GAAGTTTTTAGCTGGGCGGCAACCCAAGTCTTTACCGCCATGAATGCCACCCAAAAACTCGGTGGGGAAAACTATGTGTT GTGGGGCGGACGCGAAGGCTATGAAACACTGTTAAATACAGATTTACGGCAAGAACGTGAGCAAATTGGCCGCTTTATGC AAATGGTGGTCGAACATAAACACAAGACGGGCTTCCAGGGCACATTGTTGATCGAGCCAAAACCACAAGAGCCGACTAAG CATCAGTATGATTATGATGTTGCTACAGTTTATGGTTTCCTCAAGCAGTTTGGGCTAGAAAAAGAGATTAAAGTTAACAT TGAAGCTAACCATGCGACTTTGGCTGGACACTCTTTCCATCATGAGATTGCCAGTGCGATTGCATTAGGTATTTTCGGTT CGGTGGATGCTAACCGTGGCGATCCACAATTAGGTTGGGATACCGACCAGTTCCCGAACAGTGTGGAAGAAAATGCGCTG GTGATGTTTGAAATCCTCAAAGCCGGTGGCTTTACTACCGGTGGGCTGAACTTTGATGCCAAAGTACGCCGCCAAAGCAC AGATAAATATGACCTGTTCTATGGCCATATTGGGGCAATGGACACCATGGCTTTAGCACTGAAGATTGCAGCAAAAATGA TTGAAGATGGTCAATTAGATAAGCAAGTTGCTGAACGTTATGCCGGTTGGAATAGCGATTTGGGGCAACAAATCCTAAAA GGCAAAATGTCGCTGGAAGATTTAGCGTCCTATGCCGAGCAACATAATCTGAATCCACATCACCAAAGCGGGCATCAAGA ACTGCTGGAAAATAGGGTTAACAGCTATATCTTCGGCTGA Protein sequence : MSSYFDKLEQVRYEGSQSFNPLAFHHYNPDEIILGKRMADHLRFAACYWHTFCWGGADMFGSNAFERPWQQSGDALALAK SKADVAFEFFHKLNVPYYCFHDVDVSPEGTSLKEYLNNFAVMTDVLAEKQESSGVKLLWGTANCFTHPRYGAGAATNPNP EVFSWAATQVFTAMNATQKLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKTGFQGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIASAIALGIFGSVDANRGDPQLGWDTDQFPNSVEENAL VMFEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAAKMIEDGQLDKQVAERYAGWNSDLGQQILK GKMSLEDLASYAEQHNLNPHHQSGHQELLENRVNSYIFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-104 | 49 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-104 | 49 |
