Gene Information

Name : YE105_C3818 (YE105_C3818)
Accession : YP_004300015.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4404976 - 4405344 bp
Length : 369 bp
Strand : +
Note : -

DNA sequence :
ATGCAGACCTTACCTGTCACCTCGAAACGGGCGGCCTACGCTTGCCTATCACCCGTTATTGTCTGGCAATCCATGCTCAC
GTATCTGCTAGAGCAGCATTACGGCCTGGTGCTTAGCGACACCGAGTTCAGTGATGACGCCGTTATCCACGAACATATTG
ATGCCGGTATCTCTCTGGCTGATGCGCTGAATTTCACGGTGGAGAAGTTTGACTTGGCTCGCACCGATCACCGAGGTTTC
TCCTGCCAGGAACAATCTCCCTTTATCACGTCTATCGATATTCTCCGCGCTCGTCGAGCCACCGGTCTGATGACCCGTAT
GGGTTACCAGACCATCACCTCAGTTATCCGGGGAGGAAAGCAGGCATGA

Protein sequence :
MQTLPVTSKRAAYACLSPVIVWQSMLTYLLEQHYGLVLSDTEFSDDAVIHEHIDAGISLADALNFTVEKFDLARTDHRGF
SCQEQSPFITSIDILRARRATGLMTRMGYQTITSVIRGGKQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 7e-32 62
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-31 61
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 2e-32 61
unnamed AAL57575.1 unknown Not tested LEE Protein 6e-30 61
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 3e-32 61
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 3e-32 61
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 5e-31 60
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 9e-30 60
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 5e-30 60
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 5e-30 60
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 2e-30 60
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-31 60
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 3e-30 60
yeeV AAZ04461.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-30 60
unnamed AAC31486.1 L0007 Not tested LEE Protein 2e-29 59
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 3e-29 59
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 2e-29 59
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 3e-29 59
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-29 59
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 2e-29 59
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 2e-29 59
unnamed AAL08478.1 unknown Not tested SRL Protein 2e-28 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C3818 YP_004300015.1 hypothetical protein VFG1682 Protein 3e-32 62
YE105_C3818 YP_004300015.1 hypothetical protein VFG0663 Protein 9e-33 61
YE105_C3818 YP_004300015.1 hypothetical protein VFG1530 Protein 4e-30 60
YE105_C3818 YP_004300015.1 hypothetical protein VFG1620 Protein 1e-30 60
YE105_C3818 YP_004300015.1 hypothetical protein VFG0786 Protein 7e-30 59
YE105_C3818 YP_004300015.1 hypothetical protein VFG1069 Protein 7e-29 58