Gene Information

Name : YE105_C0327 (YE105_C0327)
Accession : YP_004296528.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus lipoprotein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 399737 - 400468 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACGGGTGCAGCGTTTGATGGCGCTATTGCTAGTGGTTATGTCCCTTTCTGGCTGTGGTATGGAGTTGTATAGCGG
CCTTTCAGAAGGGGAAGCCAATCAGATGTTGGCGTTATTGATGTTGCACCAGATCAAGGCAGAAAAGCAGTCTGAGAAGG
GAGGTACAGTCGCGCTGAATGTCGATAAAAGTCAATTTATTAACGCCGTGGAATTGCTACGACAACATGGTTTCCCCCGT
CAGCGATTTGCCTCGGTAGATGAGCTTTTCCCGTCGAATCAGTTGGTGACCTCTCCGGGGCAAGAACAGGCCAAGATGGT
CTATCTGAAAGAGCAGCAATTGGAAAGCATGTTGAGCCATATGGATGGGGTTATCCAAGCGGATGTGACTATTGCTATGC
CCGCGCCGACTGATGGAAAAAGCAGTGTTCCTCATGCCGCCTCGGTGTTTATCAAATACTCACCTGAAGTGAATCTACTG
AGTTATCAACCGCAAATAAAGAATCTGATCCGTGATGGTATTCCGGGTATCGATTTTTCGCAGATTAGTGTGGTGATGCA
ACCGACTAATTATCGGTTCAGCGCCCCGGCGACGCAGCAACAGAGTCACTCGGAAGCTGCTTTGCAATGGCTATTACGAC
ATGCCGCGACATTACAAATAGTCCTGGGTTTGCTGCTGGTGTTATTAGTCGGCTTGTCGACGACCTGTTTGGTGCGCTAT
CTGCGTCGATAA

Protein sequence : 
MKRVQRLMALLLVVMSLSGCGMELYSGLSEGEANQMLALLMLHQIKAEKQSEKGGTVALNVDKSQFINAVELLRQHGFPR
QRFASVDELFPSNQLVTSPGQEQAKMVYLKEQQLESMLSHMDGVIQADVTIAMPAPTDGKSSVPHAASVFIKYSPEVNLL
SYQPQIKNLIRDGIPGIDFSQISVVMQPTNYRFSAPATQQQSHSEAALQWLLRHAATLQIVLGLLLVLLVGLSTTCLVRY
LRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 4e-77 76
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 7e-48 54
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 6e-49 48
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 1e-48 48
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 1e-48 48
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 8e-49 48
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 5e-48 48
escJ AFO66320.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-36 45
escJ AFO66410.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-36 45
unnamed AAL06364.1 EscJ Virulence LEE Protein 2e-35 42
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 9e-36 42
escJ AAC38379.1 EscJ Virulence LEE Protein 7e-36 41
escJ YP_003223480.1 T3SS structure protein EscJ Virulence LEE Protein 2e-35 41
escJ AAC31518.1 L0039 Virulence LEE Protein 7e-36 41
escJ YP_003232148.1 T3SS structure protein EscJ Virulence LEE Protein 2e-35 41
escJ ACU09463.1 EscJ protein Virulence LEE Protein 7e-36 41
escJ AAK26710.1 EscJ Virulence LEE Protein 2e-35 41
escJ YP_003236093.1 T3SS structure protein EscJ Virulence LEE Protein 9e-36 41
escJ AAL57537.1 EscJ Virulence LEE Protein 2e-35 41
escJ NP_290273.1 hypothetical protein Virulence LEE Protein 9e-36 41
escJ CAC81857.1 EscJ protein Virulence LEE II Protein 2e-35 41
ECs4573 NP_312600.1 EscJ Virulence LEE Protein 9e-36 41
escJ CAI43879.1 EscJ protein Virulence LEE Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C0327 YP_004296528.1 type III secretion system apparatus lipoprotein VFG0510 Protein 4e-49 48
YE105_C0327 YP_004296528.1 type III secretion system apparatus lipoprotein VFG0218 Protein 2e-38 44
YE105_C0327 YP_004296528.1 type III secretion system apparatus lipoprotein VFG0725 Protein 4e-36 41
YE105_C0327 YP_004296528.1 type III secretion system apparatus lipoprotein VFG0817 Protein 4e-36 41