Gene Information

Name : YE105_C0318 (YE105_C0318)
Accession : YP_004296519.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5613
EC number : -
Position : 394318 - 395778 bp
Length : 1461 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGCATTCCATTGGTATTAATACATTAGTTTTGGACCCTTGGGGCAACGCGGTGGTTAATAAAAACAGCCCATTATC
CAAAGAAAAAGTACTTGATTGGCGAGATGCTACTCGATCATTACCCTCAGAGGCTAACACGAACTTACCGAAAGTGCCGC
AGCGAGAAGCACAAAGCGCATTGGATCGCTTACTGGGGTCTTTATCTCATTCAGGTGTAGGGGGAGATTGTGGCCGATTA
TCTCTTGATAATCCGGGTGAGACCGATATACAGCTGATTATGTCGATGGTCAGTAGCTTGAATCTTGGGCTTTTTTCCAA
CTTGTGCAAGTCGATTAGCCAACAAATGGAACGCGCCACCGATGTGCAAACTTTTCTGCGCGATAAGCGGGTTGCAGAAT
ACCAACAACAAATCGATAAGGCTGTTGAGCAAGCAGATAAGGCGAAAAAAGCCGGTATTTTTACTGCGGTATTTGACTGG
ATCGTGGGTGCTGTCGAGGTGGTCTATGGGGCATTAAAAGTTGCCGAGGGGGTGTTAACGGGTGACCCCTTGGCGATAGC
CTCAGGGGTTGCTTATCTGGCTGCGGGCACGGCGGGGTTGGTCAAAGCCGCCGCGGAAACCGCTATGCTGTTAGGCGCAT
CAAAAGAAAAATGTCAGGAAGTTATTGATGTAGCAGGAAAAGTTCAGCTAGGTTGTGAATGTTTTGCTATGGCAATTGAC
ATATTTCAGGCAGCCCGCGCAATCAATGCGGCGCGTACCGTGACCAAGGGGGCGAGCGAGGTCCTAAAATCTGGTGCGAG
TGAAGCATTGAGCGACGCTATCAAACGCGGAGCCAGTGGTGAGATAGAACAATTAGCTGAGAAGTTTGGCAAGGATGTCA
GCCAACAAGTTAGCCGCAATATCTCACTGAATGTGATGGAAACTGAAATGGTTGAGGTTGGCAATATGACGTCGGCAGCC
GCTAAACAGGCGGCCAAGGCGGAAATAGCGTTGGTGCGCAATATCACTAAGTCATTTACTCATGAAGGGATTGAAAAGCT
GGTTGGTGGTGTGGCAAAAAAATTGGCTCAGGATGCAATAAAAAAAGGCATAACTCTCACGGCGGAACAATTCAGCCAGC
AATGTGTTAAAGCCATTATGAAAAAGTCAGTGACGACGATTTTAAAAGATATAGCCACATCGCCACTGCTCATTATGCAA
AAATGTACTGCTGCCGCAGGGCAAGTTAATAGTGGCCAGTTAGCTATTCAAAGTGCAAATCTGCGAAAAGAGATTGAAAA
GCTTATTCTTGATCAGGATTTTACTCAATTTATGGATGAATGGGTCGAAAGAAATAAGCAGCATCAACTTAAACAACTTA
AAGATACTTCCGAGGCAGCACAAGATACTGTGACTAAATTAAGCGATAATATTAAACAGAATAGCATGTTACAAACTCAA
ATCGCCGGTTCATTGGTATAG

Protein sequence : 
MSHSIGINTLVLDPWGNAVVNKNSPLSKEKVLDWRDATRSLPSEANTNLPKVPQREAQSALDRLLGSLSHSGVGGDCGRL
SLDNPGETDIQLIMSMVSSLNLGLFSNLCKSISQQMERATDVQTFLRDKRVAEYQQQIDKAVEQADKAKKAGIFTAVFDW
IVGAVEVVYGALKVAEGVLTGDPLAIASGVAYLAAGTAGLVKAAAETAMLLGASKEKCQEVIDVAGKVQLGCECFAMAID
IFQAARAINAARTVTKGASEVLKSGASEALSDAIKRGASGEIEQLAEKFGKDVSQQVSRNISLNVMETEMVEVGNMTSAA
AKQAAKAEIALVRNITKSFTHEGIEKLVGGVAKKLAQDAIKKGITLTAEQFSQQCVKAIMKKSVTTILKDIATSPLLIMQ
KCTAAAGQVNSGQLAIQSANLRKEIEKLILDQDFTQFMDEWVERNKQHQLKQLKDTSEAAQDTVTKLSDNIKQNSMLQTQ
IAGSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseC YP_216408.1 secretion system effector protein SseC Virulence SPI-2 Protein 2e-58 41
sseC NP_460365.1 translocation machinery component Virulence SPI-2 Protein 1e-56 41
sseC NP_456128.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-60 41
sseC NP_805071.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-60 41
sseC CAA12187.1 SseC Virulence SPI-2 Protein 1e-56 41
sseC AAC28881.1 SseC Virulence SPI-2 Protein 1e-56 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C0318 YP_004296519.1 hypothetical protein VFG0501 Protein 5e-57 41