Gene Information

Name : YE105_C0317 (YE105_C0317)
Accession : YP_004296518.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4783
EC number : -
Position : 393858 - 394316 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTATTCAACCAAGCGATGAAATTATTAATTTCATGCGACGCGGCGGTTCTTTGCGAATGTTAGCCAAAATGGATCC
GCAAGATTTGGCTTTAGTTTATGACTATAGCGTACAGCTATGTCAGGGCGGAGAATATGACGGCGCTAAACGATTATTAA
ATTTATTGGTGCGCTTTGATCACTGGAACTTCTCTTATTGGCTGACACTAGGTTTGTGTTATCAGCAAACGGCTGATTTT
CATCAGGCAATTTATTGCTTTAGCCGGGCGGGGCAGATTCAGGTCGATGACCCCAGATCATCATGCTCTGCCGGTGAATG
TTACCTGGCTTGCGGTAATCGAATTTATGCCGAAAAAGCATTTAGAGCGGCATTGAATTGGTGCCATGCACGCCCTGAAT
GGATTCACATACAACAACAAGCCGAGCGTGGGTTGGCGGCTTTATTGCTGGAGGTTTGA

Protein sequence : 
MSIQPSDEIINFMRRGGSLRMLAKMDPQDLALVYDYSVQLCQGGEYDGAKRLLNLLVRFDHWNFSYWLTLGLCYQQTADF
HQAIYCFSRAGQIQVDDPRSSCSAGECYLACGNRIYAEKAFRAALNWCHARPEWIHIQQQAERGLAALLLEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 8e-25 43
sscA CAA12186.1 SscA Virulence SPI-2 Protein 8e-25 43
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 2e-24 43
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 2e-24 43
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 1e-24 43
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 5e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C0317 YP_004296518.1 hypothetical protein VFG0500 Protein 3e-25 43