Gene Information

Name : YE105_C3310 (YE105_C3310)
Accession : YP_004299507.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter ATP-binding
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3822481 - 3823260 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence : 
TTGTGGGCCGAAGCGCTGACTTTGGGTTATGAGGGCAAGATAATCAGCGAAAACCTGAGTGTCGCCATTCCTGATGGTGA
GTTTACGGTTATCGTCGGCCCCAACGCCTGTGGTAAATCGACGCTGCTGCGCGCCTTCAGTCGATTACTGAAACCGCAGG
CGGGTCAGGTGATTTTGGATGGTAAGAATATTGCCAGCCTTGATACCCGGCATGTTGCGCGCCATTTGGGCTTATTACCA
CAAAGCTCGCAAGCACCAGACGGGATCAGTGTGCTGGATCTGGTGGCGCGTGGTCGTTACCCCCACCAGAAATTATTGCA
GCAATGGACACAGGCTGATAAGCAGGCGGTCAGCGATGCCATGCAGGCTACTGGTGTCAGTGAACTGGCAGACAGGTCAG
TGGATGCTTTATCAGGCGGGCAACGCCAGCGGGTTTGGGTAGCTATGGTGCTGGCTCAGCAAACACCATTACTGTTATTG
GATGAGCCGACCACCTATCTGGATATCGCCCATCAGATTGATTTGCTTGAATTGTTTAGCAATCTTAATCAACAGCATAA
CCATACCCTGGTTGCTGTGCTGCATGATCTGAATCATGCCTGCCGCTATGCCACCCATATTATCGCCATGCGCGATGGAA
AGATTGTCACCCAGGGAAAGCCGCGCGAAGTGATCACCGCAGATCTGGTGGAGCATGTCTTTGGTATGCCCTGTTTGATC
ATTGATGATCCGGTGTCGCACACCCCTCTGGTTATCCCAAAGGGGCGGTTTAAGGTGTGA

Protein sequence : 
MWAEALTLGYEGKIISENLSVAIPDGEFTVIVGPNACGKSTLLRAFSRLLKPQAGQVILDGKNIASLDTRHVARHLGLLP
QSSQAPDGISVLDLVARGRYPHQKLLQQWTQADKQAVSDAMQATGVSELADRSVDALSGGQRQRVWVAMVLAQQTPLLLL
DEPTTYLDIAHQIDLLELFSNLNQQHNHTLVAVLHDLNHACRYATHIIAMRDGKIVTQGKPREVITADLVEHVFGMPCLI
IDDPVSHTPLVIPKGRFKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-65 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-65 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-65 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-65 52
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-63 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-53 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-65 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-65 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C3310 YP_004299507.1 iron-siderophore ABC transporter ATP-binding BAC0164 Protein 4e-53 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C3310 YP_004299507.1 iron-siderophore ABC transporter ATP-binding VFG0925 Protein 2e-82 62
YE105_C3310 YP_004299507.1 iron-siderophore ABC transporter ATP-binding VFG1042 Protein 4e-53 47