Gene Information

Name : YE105_C3094 (YE105_C3094)
Accession : YP_004299291.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Unknown
Product : putative prophage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3594873 - 3596156 bp
Length : 1284 bp
Strand : +
Note : -

DNA sequence : 
ATGGCACCCTCCTTGGGACCCCACACAAAGGGTCCAAAACTTGAGGGTCCCAAAATGGCAAAACTCGCTAAAAAACTCAC
GGATACTGAAATCAAAAGCACTAAACCTTCAGACAAAGAAATCAACTTGTTTGACGGTGATGGCTTAATACTAAGAATCG
CGCCCCTCTCAAGGGGTGGTAAGAAAAATTGGTATTTCAGGTATGCAGTGCCAGTAACTAAAAAGCGAACAAAGGTAAGC
CTCGGAACCTACCCCCACCTCACGTTAGCAAGAGCAAGAGTTTTGCGGGATGAATACCTATCTTTACTTGCCAATGACAT
CGATCCACAAGTCCATAACAACGATAAAGCTAATGCATTAAAGGATGCTACTGAGCACACGCTCCAAGCCGTTGCTCGAA
AGTGGTTAGATGAGAAAGTAAAGACATCTGGTATATCCAAAGACCATGCAGTAGACATCTGGCGTAGTCTTGAACGAAAT
ATCTTCCCCGGATTAGGCAATGTTCCTATCAAAGAGATCCGGCCTAAGTTATTGAAGCAGCATCTTGACCCAATTGAACA
ACGCGGTGTATTGGAAACCCTACGCCGAATCATTTCCCGCCTGAATGAAATCTTTCGCTGGGCAGCGACAGAAGAACTTA
TTGAGTTTAATCCTGCTGATAACCTCGGTCAGCGTTTTAGTAAACCTAAAAAGCAAAACATGCCCGCCCTTCCCCCCAGC
GAACTACCAAGATTTATGGCTGCACTGGCTAATGCTTCCATACGGCTGGAAACACGTATGCTGATTGAATGGCAATTGCT
TACTTGGGTTCGCCCCGGAGAGGCTGTTCGTGCGCGTTGGGCTGACATCGATACAGAGAACAAGATCTGGAACATCCCCC
CCGAATTTATGAAGATGAAACGTCCTCATAAGGTGCCGCTCAGCAAAGAAGCTCTTCGTATACTAGAAAATATGCAGCCT
ATCAGCAGCCATCGTGAGTGGGTATTTCCCAGCATAAAAACCCCACTGACCCATATGCATGAGCAAACAGCCAATGCAGC
GTTAATCCGTATGGGTTTAGGTGGTGAATTGGTTGCCCACGGTATGCGATCTATCGCAAGGACAGCAGCAGAGGAATGCG
GTAAGTTCAGGACAGAAGTTCTTGAATCGGCTTTGGCTCATACCAAAAGCACTGAGATTATAGCTGCTTACAATCGTGCA
GAGTATCTCGTCGAAAGAGCAGATCTTATGCAATGGTGGGGGGATTATATTCAAGCGCAGAAACATAAGGCTATTGCAGC
GTGA

Protein sequence : 
MAPSLGPHTKGPKLEGPKMAKLAKKLTDTEIKSTKPSDKEINLFDGDGLILRIAPLSRGGKKNWYFRYAVPVTKKRTKVS
LGTYPHLTLARARVLRDEYLSLLANDIDPQVHNNDKANALKDATEHTLQAVARKWLDEKVKTSGISKDHAVDIWRSLERN
IFPGLGNVPIKEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRWAATEELIEFNPADNLGQRFSKPKKQNMPALPPS
ELPRFMAALANASIRLETRMLIEWQLLTWVRPGEAVRARWADIDTENKIWNIPPEFMKMKRPHKVPLSKEALRILENMQP
ISSHREWVFPSIKTPLTHMHEQTANAALIRMGLGGELVAHGMRSIARTAAEECGKFRTEVLESALAHTKSTEIIAAYNRA
EYLVERADLMQWWGDYIQAQKHKAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 6e-84 46
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 6e-84 46
int AAK20773.1 integrase Not tested VPI Protein 4e-84 46
int AAK20803.1 integrase Not tested VPI Protein 4e-84 46
unnamed AAA82714.1 integrase Not tested VPI Protein 4e-84 46
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-80 45
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 5e-65 41
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 1e-64 41
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C3094 YP_004299291.1 putative prophage integrase VFG1092 Protein 4e-65 41