Gene Information

Name : YE105_C2920 (YE105_C2920)
Accession : YP_004299119.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : N-acetylneuraminate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0329
EC number : -
Position : 3388980 - 3389870 bp
Length : 891 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAGTTAACCGGCCTGATCGCAGCTCCGCACACTCCCTTTGATGAGCAGGGTGAAGTCAATTATCCCGTCATCGA
CCAAATTGCCGAGCATCTGGTGAATGATGGTGTGAAAGGGGTCTATGTGTGTGGCACCACGGGTGAAGGTATTCATTGCT
CGGTAGAAGAGCGCAAAAAAATTGCCGAGCGCTGGGTAAAAGCGGCACAAGGTAAACTGAGCCTTACTTTACACACTGGC
GCACTCAGCATTAAAGATGCTATCGACCTTTCGCGTCATGCCGAAACACTCGATATTTTCGCGACCTCAGCCATCGGCCC
ATGCTTCTTTAAACCGGGTAATATTGACGACCTGATTGCCTATTGTCAGGCCATCGCGGCAGCCGCACCTTCAAAAGGTT
TCTATTACTATCATTCCGGCATGTCCGGTGTGAATTTGGATATGGAACAATTCCTCATCAAAGCCGAATCAAAAATCCCA
AATCTGTCAGGGATTAAATTCAATAATGCGGATTTGTATGAATTCCAACGCTGTCTGCGCGTCAGCGGTGGCAAATTTGA
TATTCCATTCGGGGTCGATGAACATTTACCGGGTGGTCTGGCAGTGGGAGCTATTGGCGCAGTCGGTAGTACTTATAATT
ACGCCGCACCGCTATTCCATAAAATCATTGCTGATTTTAATGCTGGCAATCAAGTTGCCGTACAACGCGGTATGGATCAG
GTTATTGCCCTCATTCGTGTTTTGGTCGAATTTGGTGGCGTTGCTGCCGGTAAAGCTGCAATGCAATTACACGGTATTGA
TGCCGGTAATCCGCGCTTGCCATTACGTGCGCTGACTAAAGAACAGAAACAAACCGTGGTGAATAGAATGCGGGATGCAA
TCGCGATTTAA

Protein sequence : 
MKKLTGLIAAPHTPFDEQGEVNYPVIDQIAEHLVNDGVKGVYVCGTTGEGIHCSVEERKKIAERWVKAAQGKLSLTLHTG
ALSIKDAIDLSRHAETLDIFATSAIGPCFFKPGNIDDLIAYCQAIAAAAPSKGFYYYHSGMSGVNLDMEQFLIKAESKIP
NLSGIKFNNADLYEFQRCLRVSGGKFDIPFGVDEHLPGGLAVGAIGAVGSTYNYAAPLFHKIIADFNAGNQVAVQRGMDQ
VIALIRVLVEFGGVAAGKAAMQLHGIDAGNPRLPLRALTKEQKQTVVNRMRDAIAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 4e-103 76
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 4e-103 76
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-102 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C2920 YP_004299119.1 N-acetylneuraminate lyase VFG1109 Protein 2e-103 76