Gene Information

Name : YE105_C2856 (YE105_C2856)
Accession : YP_004299055.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3312406 - 3312600 bp
Length : 195 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAAAAGGTTAATACGGTTACCCGATGTGATGTCTATTACCGGGTTAAAGCGTTCTACTATTTATTTCAAGATGAA
AGAAGGGAACTTCCCTAACAATATCCCTATAGGAGAAAGATCCGTTGCATGGGTAGAGGGAGAAGTAATTAATTGGATTA
ATGGAAATATTTCAAAGAGAGAAATCAGATGCTAA

Protein sequence : 
MAKRLIRLPDVMSITGLKRSTIYFKMKEGNFPNNIPIGERSVAWVEGEVINWINGNISKREIRC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 2e-10 57
unnamed CAA21398.1 - Not tested HPI Protein 3e-10 57
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-12 53
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 8e-11 50
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 8e-11 50
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-08 49
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 6e-11 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 6e-11 48
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 4e-11 48
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 4e-11 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C2856 YP_004299055.1 phage transcriptional regulator, AlpA VFG1141 Protein 2e-11 50
YE105_C2856 YP_004299055.1 phage transcriptional regulator, AlpA VFG1118 Protein 2e-11 48