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Name : YE105_C2661 (YE105_C2661) Accession : YP_004298860.1 Strain : Yersinia enterocolitica 105.5R(r) Genome accession: NC_015224 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3073811 - 3076267 bp Length : 2457 bp Strand : - Note : - DNA sequence : GTGTGGGCCGGTCATTACACCTTTGACCCTATATTGTTAGCGAATAATAATATCAATGCTAATGCCAACACGGATCTTTC TTTATTTGAACAAGGAGGGCAACTACCGGGCACTTATCAGGTGGATATTTTCTTAGGTGATGAAAAAATGGATTCCACTA ATGTGACATTCCATGCAGTAAAATCACCGACTGGAGAATATTCGCTGCAGTCGTGTTTAACTAAAGAGCAATTATCCCGC TATGGCGTGGATGTGGATAATTACCCTGAGTTATTGCCACCAGAAAAAAATATTCAGCAGGATAAGCAAGCAAGCCAATG TGTTAATTTGGCGGCAATTCCACAGGCCAGTGAAGAGTTTGAGTTTTATGCTATGCGGCTGGTGCTGAATATTCCGCAAG TGGCGTTACGGCCTAAGGATGAAATACCTGTTGAGCGTTGGGATGATGGTATTACTGCTTTTTTGCTGAATTATATGGCC AATAGCAGTACCACAACCTATCGGCAAACGGGTGAACAGCAAAGTTCGCACTATGTTCAGTTGTATCCCGGCTTCAATAT CGGGGCATGGCGTATTCGTAATGCCACCAGTTGGAATCAATCGGGTAATAGCGCTGGCAAGTGGCAAAGCAGCTATATCT ATGCCACACGCGGACTTTATCGCTTAAAGAGTCGTGTCACATTAGGGCAAAGTTACACACCCGGTGACTTTTTCGATAGC GTGCCCTTTAGTGGCGTGATGTTGGGCGATGATGACAATATGTTGCCGAGTAGTCAGCGCGACTTTATACCGGTAGTGCG TGGTATTGCCCGTAGCCAGGCGCGAGTAGAAGTGCGGCAAAATGGCTACCTGCTCTACAGCACCGTGGTGTCACCGGGGC CTTTTGAGTTAACTGACATTCTGCCAAGTCACTCAAACGGTGATTTGCATGTGACGGTGTTGGAAAGTAACGGCACAACG CAGCAGTTTACCGTACCTTATAGCGTACCGGCGATAGCGCTACGCAAGGGGCGTTTGCGCTACAACCTGATGGCAGGGCG ATATCGCCCTGCTAATGTGGATGTGGAAACCACTCCCATCGCACAGGCCACAGTCGCCTATGGTTTGCCGTGGAATCTGA CCGCCTTTGTCGGCGGGCAATGGTCGCCGCACTATCAGGCCACCACGGCTGGGATGGGGGTGATGCTGGGGGATTATGGG GCATTATCATCCAGCATTACCCAAGCTACCAGTGAATATCGGCAGCAGCAGCCGGTGAAAGGGCAAGTATGGGAAGTGCG CTATAACAAAACGTTGCAAGCATCGGATACTTCATTTTCAGTGGTCAATAGCCAATATAGCACCGCTGATTTCAGTAATT TATCCGATGTGTTGCAGAGTTATCGGCGTCATGATTACAGCCGCAGGGATTGGCACTCAAACTCACTGCGTAACCAAACC CATGTGGTCGTCGGGCAACCCTTAGGTCAGTTTGGCTATCTGAATCTCAATTGGTCGCGTCAGAATTATCGTGATGCACC GGCGAGCAGTTCGTGGGGCGTTCAGTACAGCTTCAATATCGGTAATTTATATTGCTCACTGGATTGGACACAAAATCAGT ATCGCGGTAATCAGGATCGCCTGTTGAGTTTGTCTGTTAGTATGCCGCTGGGGCGCGAGCGTGATACTTATGCGGCTTAC CGCATGACGTCATCTGATAATAGCAAAGATCACGAAATGAGCTTGTATGGCCATGCTTTCGATAATCGGCTGAGCTGGAA TGTGCGCCAGACAGAACGTTATGCTCAATTTCACTCCGGTGAAAATAGCGGTTCACTGGGCCTGGATTGGCAGGGGAGCT ACGGAGATATTGGCGGGAATTATTATTATACTCCGACTATACGCCAGTTCAGTGCCAATGTGTCCGGCGGGGCGGTTATC CATCGGCACGGGCTGACACTCGGGCCGCAGATCAATGGCACTGCCGCACTGGTTGAAGTGCCGGGAGTGAGCGGAGTGTC CACCAGTGAAGATCACCGGCTGAAAACGGATTTTCGCGGTTACAGTATCGTGCCGAATATTTTCCCTTATGAAGAGCATG ATATTTTGCTGGAAACTACCGATTTACCACCGGACGCTGAGGTGACAAAAACCGATGCCAAGGTGCTGCCGACCGAAGGG GCGATAGTGCGCGCCAGCTTCAGCCCACAAATCGGGGCGCGGGCGCTGATGACCATCACCCGCAATAATGGCGAAACCAT TCCGTTTGGTGCGATGGCCAGTTTGGTTAATCAGCCCGCTAATGCGGCGATTGTCGACGAAGGCGGGAAAGCCTATCTGA CTGGCTTGCCGGAAACCGGGCAGTTGTTGGTGCAGTGGGGTAGGGGTGCCAGCCAACAGTGTCGGGTGGATTACCAGCTT GCGAACGCGAAAAAAGGTGACGCCGGGCTATATATGCTCAGCGGGGTCTGTCATTAA Protein sequence : MWAGHYTFDPILLANNNINANANTDLSLFEQGGQLPGTYQVDIFLGDEKMDSTNVTFHAVKSPTGEYSLQSCLTKEQLSR YGVDVDNYPELLPPEKNIQQDKQASQCVNLAAIPQASEEFEFYAMRLVLNIPQVALRPKDEIPVERWDDGITAFLLNYMA NSSTTTYRQTGEQQSSHYVQLYPGFNIGAWRIRNATSWNQSGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDS VPFSGVMLGDDDNMLPSSQRDFIPVVRGIARSQARVEVRQNGYLLYSTVVSPGPFELTDILPSHSNGDLHVTVLESNGTT QQFTVPYSVPAIALRKGRLRYNLMAGRYRPANVDVETTPIAQATVAYGLPWNLTAFVGGQWSPHYQATTAGMGVMLGDYG ALSSSITQATSEYRQQQPVKGQVWEVRYNKTLQASDTSFSVVNSQYSTADFSNLSDVLQSYRRHDYSRRDWHSNSLRNQT HVVVGQPLGQFGYLNLNWSRQNYRDAPASSSWGVQYSFNIGNLYCSLDWTQNQYRGNQDRLLSLSVSMPLGRERDTYAAY RMTSSDNSKDHEMSLYGHAFDNRLSWNVRQTERYAQFHSGENSGSLGLDWQGSYGDIGGNYYYTPTIRQFSANVSGGAVI HRHGLTLGPQINGTAALVEVPGVSGVSTSEDHRLKTDFRGYSIVPNIFPYEEHDILLETTDLPPDAEVTKTDAKVLPTEG AIVRASFSPQIGARALMTITRNNGETIPFGAMASLVNQPANAAIVDEGGKAYLTGLPETGQLLVQWGRGASQQCRVDYQL ANAKKGDAGLYMLSGVCH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 2e-177 | 47 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 6e-164 | 44 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 7e-162 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YE105_C2661 | YP_004298860.1 | outer membrane usher protein | VFG0853 | Protein | 2e-163 | 45 |
| YE105_C2661 | YP_004298860.1 | outer membrane usher protein | VFG0944 | Protein | 7e-164 | 44 |
| YE105_C2661 | YP_004298860.1 | outer membrane usher protein | VFG0849 | Protein | 2e-150 | 42 |
| YE105_C2661 | YP_004298860.1 | outer membrane usher protein | VFG0857 | Protein | 7e-151 | 42 |
| YE105_C2661 | YP_004298860.1 | outer membrane usher protein | VFG0419 | Protein | 3e-143 | 41 |
