Gene Information

Name : YE105_C1980 (YE105_C1980)
Accession : YP_004298179.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : ATP-binding transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2286112 - 2287002 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence : 
ATGAACACTGCTGTTTTTGTCCGCCCGGAGTTGATAGTAGATAACGTCACTGTCACCTATAACAATGGGCATACTGCCAT
TTATGACGCCAGTTTCTCACTAATGGGTGGGACTATCTGCGCACTGGTCGGCGTCAACGGGAGCGGTAAATCCACCCTGT
TTAAAAGCATCATGGGGCAAGTCAAGCCCAGTGTGGGCAAAGTAGAGCTGAGCAATAAGCCAATTAGCCATGCATTAAAG
CAAAATACTATTGCCTACGTTCCACAGACGGAAGATGTAGACTGGAATTTTCCGGTATTAGTCGAAGACGTTGTCATGAT
GGGCCGCTACGGGAAAATGAATTTTTTACGCATTCCGAGTCGCGAAGATAAGGCCATTGTTGATAAGGCTATTGAGCGGG
TCGGATTAACCGTATTGCGTTCACGTCAGATAGGCGAACTGTCCGGCGGGCAGAAAAAACGCGTGTTTCTGGCGCGAGCA
CTGGCCCAGCAAGGTACTGTATTACTGCTAGATGAGCCATTCACCGGTGTTGATGTCAAAACGGAAAATGCCATCATAGA
TTTGTTGCGAGCGTTGCGTGATGAAGGTCACCTGATTTTGGTTTCGACCCACAACCTCGGCAGCGTGCCAGAGTTTTGTG
ATCATGTGATTCTGATTAATCAAACGGTACTGGCCGCAGGCCCTACAGAAACCACCTTTACTCAAAAGAACCTGGAAATG
ACCTTTGGTGGCGTATTGCGCCATATCAACTTGTCGGGGAACACGCTGCACGACGATAATGATCCACGCACCGTGACTGT
CATCACCGATGACGAGCGCCCAGCGGTATTTTATGGTCATACCAAAAATGATCCACCAGCACAAAGCCAGTCGAAGGAGA
GCAATCCCTGA

Protein sequence : 
MNTAVFVRPELIVDNVTVTYNNGHTAIYDASFSLMGGTICALVGVNGSGKSTLFKSIMGQVKPSVGKVELSNKPISHALK
QNTIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDKAIVDKAIERVGLTVLRSRQIGELSGGQKKRVFLARA
LAQQGTVLLLDEPFTGVDVKTENAIIDLLRALRDEGHLILVSTHNLGSVPEFCDHVILINQTVLAAGPTETTFTQKNLEM
TFGGVLRHINLSGNTLHDDNDPRTVTVITDDERPAVFYGHTKNDPPAQSQSKESNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-79 66
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-80 66
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-80 66
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-79 66
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-79 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1980 YP_004298179.1 ATP-binding transport protein BAC0440 Protein 4e-134 94
YE105_C1980 YP_004298179.1 ATP-binding transport protein BAC0350 Protein 9e-80 66
YE105_C1980 YP_004298179.1 ATP-binding transport protein BAC0400 Protein 1e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1980 YP_004298179.1 ATP-binding transport protein VFG0526 Protein 8e-80 66