Gene Information

Name : YE105_C1979 (YE105_C1979)
Accession : YP_004298178.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : chelated iron transport system membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2285228 - 2286112 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGGAAATCTTACTGCAACCCTTTAACTACAATTATATGGTCAAGGCCATTTGGGTCAGCGCGATTGTTGGTGCCGT
CTGCGCTTTCTTGTCCGCTTATTTAATGCTGAAAGGCTGGTCGCTGATGGGGGATGCGCTCTCTCACTCCGTGGTACCCG
GCGTCGCTGGCGCGTATGCCCTCGGCCTGCCCTATGCAGCAGGGGCATTCTTTACCGGTATGCTCGCCGCATTGGCAATG
ACTTTAGTGCGCCACATCACTCGCCTGCGTGAAGATGCCATTATCGGTTTTATCTTCTCCACCTTCTTTGCCGTCGGGCT
GCTCATTGTTTCGCTCAATCCCACCTCGGTCAATGTGCAGTCGATCATTTTCGGCAATATTTTGGGCATCGCCGATGAAG
ATGTGCTGCAAGTCGAAATCATTATTTTGATCTCTTTTGTGATTTTGTGTCTGATTTGGAAAGATTTACTGGCGGTGTTT
TTCGATGAAAGTCATGCCATGTCAATTGGCTTGTCACCACTGCGCTTAAAGATTTTATTCTTCACCTTATTAAGTGCTTG
TACGGTGGCGGCGTTGCAAACTGTCGGGGCGATTTTGGTGATTGCTATGGTCGTGACACCGGGTGCCACCGCCTACTTGC
TGACAGACCGATTCAGCCGTTTGCTGGTGATAGCGATTGCCATCGGCGCATTTACCAGCGCCTTTGGTGCCTATCTCAGT
TTCTATCTTGATGGCGCAACAGGTGGAGTTATCGTCACCTTACAAACCGTCGTGTTCCTACTGGCCTTTTTCTTCGCCCC
CAAACACGGTTTATTGGCGACGCGCTATCAATCGCATCAGAAGCGCCGTCACCCTGCGGTCTCTCACCCGGAGGATAATG
CATGA

Protein sequence : 
MLEILLQPFNYNYMVKAIWVSAIVGAVCAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGLPYAAGAFFTGMLAALAM
TLVRHITRLREDAIIGFIFSTFFAVGLLIVSLNPTSVNVQSIIFGNILGIADEDVLQVEIIILISFVILCLIWKDLLAVF
FDESHAMSIGLSPLRLKILFFTLLSACTVAALQTVGAILVIAMVVTPGATAYLLTDRFSRLLVIAIAIGAFTSAFGAYLS
FYLDGATGGVIVTLQTVVFLLAFFFAPKHGLLATRYQSHQKRRHPAVSHPEDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-74 65
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-74 65
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-74 65
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 2e-74 65
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-74 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1979 YP_004298178.1 chelated iron transport system membrane protein BAC0441 Protein 1e-112 95
YE105_C1979 YP_004298178.1 chelated iron transport system membrane protein BAC0351 Protein 1e-74 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1979 YP_004298178.1 chelated iron transport system membrane protein VFG0527 Protein 1e-74 65