Gene Information

Name : YE105_C1710 (YE105_C1710)
Accession : YP_004297909.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2012391 - 2013143 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGATGTCCCTGCGTCCGCTCATCAATAAAGCCCCCCTACTGCTACTCGCTCTGCTGTGCTCTCCGGCGGCAATGGCGCA
ACTGCCGGGTATTATTAGCCAACCGTTAGCCAATGGTGGGCAAAGCTGGTCTTTACCGGTACAGACGCTGGTCTTTATCA
CCACACTGAGCTTCCTGCCCGCCGCATTACTGATGATGACCAGTTTTACCCGCATCATTATTGTGCTTGGTTTGTTGCGC
AACGCATTGGGTACCCCCTCAGCGCCACCGAACCAAGTGATGCTGGGTTTGGCGCTGTTCCTGACTTTTTTCATCATGTC
GCCAGTGTTTGACAAGGTCTATCAAGATGCTTATCTGCCCTTCAGCCAGGACAAAATAAGTATGGAAGTGGCGATGGATA
AAGGCTCGCAACCGCTGCGCGAGTTTATGTTACGCCAGACCCGCGAATCTGACCTGGCACTGTATGCCCGTTTAGCCAAT
CTGCCGCCACTGGAAGGGCCAGAAGTTGTGCCCTTGCGCATTCTGTTACCGGCGTATGTGACCAGTGAGCTGAAAACAGC
TTTCCAAATTGGTTTTACCGTATTTATTCCGTTTTTGATTATCGACCTGGTGGTTGCCAGTGTGCTGATGGCTCTGGGGA
TGATGATGGTTCCGCCCGCCAGTATCTCGCTGCCCTTTAAACTAATGCTGTTTGTGTTGGTTGATGGTTGGCAACTGTTA
CTGGGTTCTCTGGCACAAAGCTTTTACAGCTAA

Protein sequence :
MMSLRPLINKAPLLLLALLCSPAAMAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALLMMTSFTRIIIVLGLLR
NALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQDAYLPFSQDKISMEVAMDKGSQPLREFMLRQTRESDLALYARLAN
LPPLEGPEVVPLRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLL
LGSLAQSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-25 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-25 44
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-25 44
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 6e-27 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-30 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-27 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1710 YP_004297909.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-93 100
YE105_C1710 YP_004297909.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-68 68
YE105_C1710 YP_004297909.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-57 58
YE105_C1710 YP_004297909.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-57 55
YE105_C1710 YP_004297909.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-29 42