Gene Information

Name : YE105_C1591 (YE105_C1591)
Accession : YP_004297790.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : Clp ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1863920 - 1866589 bp
Length : 2670 bp
Strand : +
Note : -

DNA sequence :
GTGGCTATTACAAGGAAAAATCTTTTCGGCAAACTGGATGCCACTCTTTTCAAAGGTATTGAAAGTGCGACAACGATTTG
TAAATTGCGTGGCAACCCTTATGTAGAGTTGATTCATTGGGTGAACCAACTTTGGCATCAAGAAGATAACGATCTTAAAC
ATATTGTTCGCTATTTTGCTGTCGACGTAGATGCTTTTGAACGTGGCCTGGCTCAAGCACTTGCCCGTTTGCCCGTCGGT
GCGACCAGCATTTCAGATTTTTCATACCATATCGAATTAGCAATCGAACGGGCATGGGTGTACGCCAGCCTGGAGTGTTT
AGATACACGTATTCGCAGCGGACATTTGTTGCTGGCAATGCTAACCAATATGGAGTTGCGCCGGGCACTGTTGGCTATTG
CTCCAGAAATGGAAAAAATTCCACTGGAGCATTTGAGCAGCGATTTTAACTTTATTACGCAGGCATCGCCGGAAACCAAT
GAAGCGGCCACCGATGGTAGCCCAATGTATGACGGCGCATTACCGGGTGAAGCCAGCAATGCTATTAACGGCAAAAGTAC
CGCGACATTGGCGCAGTACACCACGGATCTGACTGCATTAGCTCGTGAAGGCAAGATAGACCCGGTACTGGGGCGCAACC
ATGAAATCAGTACGATGGTGGATATTTTACTGCGTCGTCGACAAAACAACCCGTTGCTCACCGGTGAAGCTGGCGTGGGT
AAAACAGCCGTAGTTGAGGGTCTGGCGCTGGCCATTGTCGCGGGTGAAATGCCTCCAGCACTGAGTCAGGTGAGTCTGCT
AACCCTGGATGTTGTGGCTCTTTCGGCGGGTGCCAGCATGAAAGGCGAGTTTGAAGCACGCCTGAAGAATGTTTTAGACG
AAGCAATGGCTTCACCAACTCCTGTCATCCTGTTTATAGATGAAGTTCACACTCTGGTCGGTGCGGGGGGGAATGCAGGA
ACCGGTGATGCAGCTAATTTACTCAAACCGGCACTGGCGCGCGGTCAGTTGCGCACCATTGGCGCGACAACCTGGAGTGA
GTTTAAACGCCATATTGAAAAGGATCCGGCGCTAACTCGTCGTTTCCAGGTACTTCAGGTCGATGAACCTGATGAAGATA
CTGCTATTTCGATGCTGCGTGGATTGACTCCGGCGTTAGAGAAGCACCACGGCGTATGGATCATGGATGAAGCCTTGCAA
GCTGCGGTGCGATTATCGCATCGTTATATCCCTGCTCGCCAGTTACCGGATAAAGCGATCAGCTTGCTTGACACCGCTTG
TGCACGTGTTGCCGTCGCACAATTCTCACAGCCGGCAGAATTGCAGCAATTGACTTTCCAGAGTGAAACCGCGCAAACCG
AGTTGTCATCGCTGGAAAAAGCCCGACATTTCGGCAAAGGGCAGGACGAGCGCGCAGCACTGTTAGAAGCCACGATTGCT
CAGCACTCGGAAGCGGCAAACAAACTTGAACAACGTTGGCAGGCAGAGCGTGACTTGGTCACCGCTATTACAGCTACGCG
AACGGCGCTGTATGAACTGGTGTCGCAACCCACGCCTGATGAAGAAAAACGCCAGCAGTATCAGCAGCAATTGGCGCAAC
TTGAAGAGCAATTATTGCTTATTCGCAGTGCGCAGCCTTTGGTACAAGCTGAGGTTAATGCAACCGTGATCGCCAACATT
GTTGCGGATTGGACCGGGATTCAAGTCGGACAAATGCTCAAAGACGATATTCGTGCCGTGATGGAGCTGCCGCAACGCCT
CGAAGAGCGAGTGATTGGTCAGCCGCATGCGTTAGTCCAGTTGAGCGAAAATATTATGACTGCACGTGCGGGGATGGCAG
ACCCAAGGAAACCGTTGGGTGTCTTTATGTTGGTTGGCCCTTCCGGGGTGGGTAAAACAGAAACGGCATTGGCCATTGCG
GAAAGTATGTATGGTGGTGAGCAAAACCTTATCACGATTAATATGAGCGAATACCAAGAGTCACATACGGTTTCCTCATT
AAAAGGCTCGCCACCGGGCTACGTGGGATATGGCGAAGGTGGTGTATTAACCGAGGCAGTACGGCGTAAACCTTATAGTG
TTGTGCTATTAGATGAAATTGAAAAAGCACATTCAGATGTCCATGAACTGTTCTTCCAGGTATTTGATAAAGGCCAGATG
GAAGATGGCGAAGGGCGGTTTATTGATTTTAAGAACACTATTTTGCTGTTAACCAGCAATGTGGGTAGCGAATTATTAAG
TAACTTATTTGCTGATCCGGATACTGCTCCCGATCAAGATGGAATATTAAGTGCGTTGCAACCTGAATTGCTGAAAGTAT
TCCCCGCCGCATTTTTGGGTCGCGTCACTGTGATTCCTTATTTGCCGCTCCAGCAGAGCGCGTTGCAGCATATTGTTCGA
TTACATTTAGATCGTATCGGCCAGCGTTTACAGTCTCAGCATCAGCTGACGTTGCAATACAGTGATGTGGTCGTTGACGA
TGTAGTTAGCCGCTGCTCAGTAGCAGAAACCGGCGCCCGTATGCTTATTCGTTATATTGAACAGAATATTACACCTGAAA
TTGGCAAATTTATTTTACGTGACCACGATGCGATACCTAATCAGATCGTGTTCGTCGATAAAGTTGAAAATAAATTTACT
ATTTCTGTACTGAATGAAAAAGATAAATAA

Protein sequence :
MAITRKNLFGKLDATLFKGIESATTICKLRGNPYVELIHWVNQLWHQEDNDLKHIVRYFAVDVDAFERGLAQALARLPVG
ATSISDFSYHIELAIERAWVYASLECLDTRIRSGHLLLAMLTNMELRRALLAIAPEMEKIPLEHLSSDFNFITQASPETN
EAATDGSPMYDGALPGEASNAINGKSTATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPTPVILFIDEVHTLVGAGGNAG
TGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQ
AAVRLSHRYIPARQLPDKAISLLDTACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKARHFGKGQDERAALLEATIA
QHSEAANKLEQRWQAERDLVTAITATRTALYELVSQPTPDEEKRQQYQQQLAQLEEQLLLIRSAQPLVQAEVNATVIANI
VADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQLSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIA
ESMYGGEQNLITINMSEYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQM
EDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLGRVTVIPYLPLQQSALQHIVR
LHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVAETGARMLIRYIEQNITPEIGKFILRDHDAIPNQIVFVDKVENKFT
ISVLNEKDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 60
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-125 46
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-125 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1591 YP_004297790.1 Clp ATPase VFG2076 Protein 0.0 54
YE105_C1591 YP_004297790.1 Clp ATPase VFG2084 Protein 1e-139 44