Gene Information

Name : YE105_C1329 (YE105_C1329)
Accession : YP_004297528.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Unknown
Product : putative cp4-like integrase protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1584642 - 1585835 bp
Length : 1194 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGTTAACTGATACCAAAATTCGTAATGCGAAACCCCAAGAAAAAGCCTATCAATTGCAGGACGGTAACGGCCTGTA
TTTGGATGTGCGCCCTTCCGGTGTAAAGACCTGGCGATATCGGTACTGGGTTACCCCTACTAAAGATGGTCGCTACACTA
TTGGCAGCTATCCTGCCGTATCTTTGGCTGAAGCTCGTAAGGTAAGAGAGTGGGCGCGAGAACAGGTTAAAAGTGGCATA
GTTCCCAAAGAAGCCAAAGCAACAGAACGCGACATCGCGAAGGCTGAAAGCGCTAATACATTCGAAATAGTGGCCAGAGA
GTGGATGGCTAAAAAGTGGGATAACTGGTCAGTTAATACCAAAAACCAAATAATAGCTTTCATGGATAATGATATCTTTC
CGGCTATTGGTGGCATGCCTATGCGGGAAATTAACGCCTCGCATATATTGAAAATAATCAGAGAATTAGAGAACCGTGGT
GCGATCTCTGTTGCCGTCAAAACCCGTCAGTGGTGCTCTGCTATTTTTTGTTATGGGGTTGCCACTCTACGGGCGGATTC
TGATCCAGCAGCGGCCCTTAAAGGAGCGATTATCACTCCAAAGATTGTGCATTCTCGATCGCTTACTGGTGATGAGTTAC
GTGATTATTACTTGCGGTTGGAAAGCTACACCGGTACCAGGGCGACTATTATTGCCCTTAAGATATTGCCGTTAGTCTTT
GTGCGACAAGTTGAGTTGCGCTCTGCGGAGTGGGCGCACATCGATTTTGATAACGCAGAGTGGGTTATCCCTGCGGAACT
AATGAAGATGCGCCGTATTCATCGGGTGCCTTTGTCTAAACCAGTGCTATCCCTGCTTCACGAGTTGAAAGAATTAACAG
GTAAACGTCGCTGGCTTTTCCCAAACACAAGGTTGGATACGTTTATGGGGGCATCGACTCTCAACTGGGCTATTGTGCAT
ATGGGCTACGGGAGAAAGGTTTTAACAACCCACGATTTCCGCGCGACGGCCTCAACGAGGCTGCACGAAATGGGGTATCG
GCATGACGTGATCGAACGACAGCTAGCCCACGTTGAAAAGAACCGTGTTTCTGCTGCGTACAATCACGCCGAATATATGC
CGGAAAGAAGGGAATTAATGGAAGGGTGGGGAAGGTGGGTTACTGGCCTGCTTGCTGCTGATTCTCCGCAATAA

Protein sequence : 
MKLTDTKIRNAKPQEKAYQLQDGNGLYLDVRPSGVKTWRYRYWVTPTKDGRYTIGSYPAVSLAEARKVREWAREQVKSGI
VPKEAKATERDIAKAESANTFEIVAREWMAKKWDNWSVNTKNQIIAFMDNDIFPAIGGMPMREINASHILKIIRELENRG
AISVAVKTRQWCSAIFCYGVATLRADSDPAAALKGAIITPKIVHSRSLTGDELRDYYLRLESYTGTRATIIALKILPLVF
VRQVELRSAEWAHIDFDNAEWVIPAELMKMRRIHRVPLSKPVLSLLHELKELTGKRRWLFPNTRLDTFMGASTLNWAIVH
MGYGRKVLTTHDFRATASTRLHEMGYRHDVIERQLAHVEKNRVSAAYNHAEYMPERRELMEGWGRWVTGLLAADSPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 2e-71 43
int ACU09430.1 integrase Not tested LEE Protein 3e-68 43
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 4e-68 43
ECs4534 NP_312561.1 integrase Not tested LEE Protein 4e-68 43
int AAC31482.1 CP4-like integrase Not tested LEE Protein 3e-68 43
int AAD44730.1 Int Not tested SHI-2 Protein 2e-67 43
int CAC39282.1 integrase Not tested LPA Protein 6e-68 43
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-68 43
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 2e-68 42
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-66 42
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-66 42
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1329 YP_004297528.1 putative cp4-like integrase protein VFG0783 Protein 2e-68 43
YE105_C1329 YP_004297528.1 putative cp4-like integrase protein VFG0598 Protein 2e-66 42