Gene Information

Name : YE105_C1197 (YE105_C1197)
Accession : YP_004297396.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1426388 - 1427074 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAATAAACACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAATCCGCTCAGACAATTGCGCTGATTGGTGAGTCAGGTTCAGGTAAATCAACTTTACTGG
GAATTCTGGCGGGCCTCGATGATGGCAGTAGCGGCGAAGTAAGTTTACTCGGCCAGTCTTTGACCGCGATGGATGAAGAG
GGGCGGGCGCAACTGCGGGCAAAAAATGTCGGTTTTGTTTTCCAATCATTTATGTTGGTGCCGACACTTAATACATTGGA
AAACGTGCAGCTTCCGGCGCTGTTACGTGGTGAAAGTGAACGCGAGGGCAAAGTGCATGCCATTGAGCTATTAAAGCTGG
TGGGCCTTGAGAAACGCCTTCACCACCTTCCTGCCCAACTCTCCGGCGGCGAGCAGCAGCGGGTGGCGCTGGCTCGGGCT
TTTAGTGGTCGGCCAAAAGTGTTATTTGCCGATGAGCCAACCGGCAATCTTGACCGCCATACCGGTGACCGTATTGCCGA
CTTACTCTTTTCTCTTAATCGCGACTATGACACCACTCTGATACTGGTAACCCATGATGTGCAACTGGCTGGCCGTTGTC
AGCGTCGGCTGCGGCTACAAGACGGTAAGTTGTGGGAGGAAGCATGA

Protein sequence : 
MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKSAQTIALIGESGSGKSTLLGILAGLDDGSSGEVSLLGQSLTAMDEE
GRAQLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESEREGKVHAIELLKLVGLEKRLHHLPAQLSGGEQQRVALARA
FSGRPKVLFADEPTGNLDRHTGDRIADLLFSLNRDYDTTLILVTHDVQLAGRCQRRLRLQDGKLWEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1197 YP_004297396.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 4e-36 47
YE105_C1197 YP_004297396.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 1e-37 43
YE105_C1197 YP_004297396.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 4e-37 41