Gene Information

Name : NAL212_0716 (NAL212_0716)
Accession : YP_004293815.1
Strain : Nitrosomonas sp. AL212
Genome accession: NC_015222
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 605233 - 606738 bp
Length : 1506 bp
Strand : -
Note : TIGRFAM: Lysyl-tRNA synthetase, class II; KEGG: neu:NE2355 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type

DNA sequence : 
ATGATGCAAGAAAATCCACCGATCAGTCTTGATGAAAATCAAATTATTGCTGAACGCCGCGCCAAGCTGGCTGAAATACG
CCAGATCAACAATGCTTTTCCCAATACATTCAGACGCGAGCACTTAGCTTCAGAGCTATATCAACAATTTAATGTATGCT
CCAAAGAAGAGTTGGAAGAACAATCAGCTGTAGTCAAAATAGCCGGACGTATGGTGCTAAAGCGCGTCATGGGTAAGGCC
AGCTTTGCAACCATTCAGGATATGACCGGACGCATTCAGTTGTATATCTCGAACGATCATACCGGAGAAACTGCGCATGC
GGCATTCAAGCATTACGACTTGGGTGATATCCTGGGCGCGCAAGGCATTTTATTCAAAACCAAAACAGGTGAACTCTCCA
TTCGCGTCACTGAGTTACAATTATTAACAAAATCCTTGCGCCCTTTACCGGAGAAATTTCATGGCTTGGCCGACCAGGAG
CAAAAATATCGTCAACGTTACCTTGATCTAATTACCAACGAAGAAACACGCAGGGTATTCACTATTCGTTCCCGAGTCAT
CCAGGCAATTCGTGAATTCTTTGTCGAACGCAATTATCTGGAAGTTGAAACGCCAATGATGCATCCGATTCCCGGAGGCG
CATCGGCAAAGCCCTTTTCCACGCATCATAACGCCCTGGACATGGCGTTATTCTTGCGCATCGCACCTGAACTGTATCTG
AAACGCCTGGTTGTGGGCGGCATGGAAAAAGTTTTTGAAATTAATCGCAATTTTCGTAATGAAGGGATCTCCACACGGCA
TAATCCTGAGTTCACCATGCTGGAATTCTATGAAGCTTATCAGGATCATACCTACCTGATGGACTTCACCGAGCAAATGC
TCGCATATACCGCGCAAAAAGTACTGGGCACCACGCACCTTACCTACCAAGGCAAGACGATGGATCTATCCAGACCATTC
ATGCGTTTGACCATCATCCAGGCCATCCAGAAATTCCATCCGCACTATACTGCCGCACAATTGAATGATCGTAATTATCT
GATCCAAGCGTTGGAGGCATTGAAGATTCACTACAATCCAAACGATGGGCTCGGTGGTTTGCAACTATCGCTGTTCGATG
AAACCACCGAGCATCTGTTGTTTGAACCCACATTCATCGTTGATTACCCGGCGGAAGTATCCCCGTTAGCGCGGCGTAAC
GACAACAACCCTGATATCACTGATCGTTTTGAGCTGTATATTGCCGGACGTGAAATTGCTAATGGATTTTCTGAATTGAA
CGATCCGGAAGATCAAGCGGCACGTTTCCTGGAACAAGCCAAAGCCAAGGATGCTGGCGATAGTGAGGCGATGCATTATG
ACGCAGACTACATCCGTGCATTGGAATACGGCTTACCGCCCACAGCCGGCGAAGGTATCGGCATCGATCGCTTGGTGATG
CTGTTAACTGACAGTCCGAGTATTCGCGATGTCATTTTGTTTCCGCAATTAAGACGGGAAGATTAG

Protein sequence : 
MMQENPPISLDENQIIAERRAKLAEIRQINNAFPNTFRREHLASELYQQFNVCSKEELEEQSAVVKIAGRMVLKRVMGKA
SFATIQDMTGRIQLYISNDHTGETAHAAFKHYDLGDILGAQGILFKTKTGELSIRVTELQLLTKSLRPLPEKFHGLADQE
QKYRQRYLDLITNEETRRVFTIRSRVIQAIREFFVERNYLEVETPMMHPIPGGASAKPFSTHHNALDMALFLRIAPELYL
KRLVVGGMEKVFEINRNFRNEGISTRHNPEFTMLEFYEAYQDHTYLMDFTEQMLAYTAQKVLGTTHLTYQGKTMDLSRPF
MRLTIIQAIQKFHPHYTAAQLNDRNYLIQALEALKIHYNPNDGLGGLQLSLFDETTEHLLFEPTFIVDYPAEVSPLARRN
DNNPDITDRFELYIAGREIANGFSELNDPEDQAARFLEQAKAKDAGDSEAMHYDADYIRALEYGLPPTAGEGIGIDRLVM
LLTDSPSIRDVILFPQLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-130 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NAL212_0716 YP_004293815.1 lysyl-tRNA synthetase VFG1668 Protein 7e-131 57