Gene Information

Name : NAL212_3188 (NAL212_3188)
Accession : YP_004296108.1
Strain : Nitrosomonas sp. AL212
Genome accession: NC_015222
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3168640 - 3170535 bp
Length : 1896 bp
Strand : -
Note : KEGG: nmu:Nmul_A2285 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGCATTACAGTTTTAAATCCAAAAAATTTTTTGAGCGCAACCGCTCAAGTCGATGAGGCTGCCGTAAAGCCGCTGCC
GAATTCACGCAAAATCTATGTACAAGGCTCTCGTCCGGATATACAAGTGCCGATGCGGGAAATCCGTCAGAGCGATACGA
CGACCAGTATGGGTGGAGAAAAAAATCCACCGATCTGGGTTTACGATACTTCCGGTCCGTATACCGATCCTGCGGTAAAA
ATCGATATCCGCTCCGGTTTGCCTGCATTGCGGGAAAAATGGATTGCCGAGCGGGATGATACCGAAATTCTGGCCAGTCA
TAATTCTGCCTATAGCCAAGCGCGCTTGCAGGATCCCAAACTGGCGGATATGCGTTTTAACCTGCAGCGCCTGCCGCGCC
GTGCCATGACAGGCTTGAATGTCACGCAAATGCATTACGCGCGCCGTGGCATCATAACACCGGAAATGGAATATATTGCC
ATCCGCGAGAATCAGCGCGTGGAAGCAATGAATGTGCAAAATCATGAATTGTTGGCGCGACAGCATCCGGGGCAGGATTT
TGGCGCATCATTACCGAAAATGATCACAGCGGAGTTTATCCGTGCCGAAGTAGCGCGCGGGCGTGCCATTATTCCGGCAA
ATATCAATCACCCCGAATCCGAACCGATGATTATCGGACGAAATTTTCTGGTGAAAATCAACGCCAATATTGGTAATTCC
GCATTGGGTTCGAGTATTCAGGAAGAAGTGGAAAAAATGACCTGGGCGATCCGATGGGGCGGCGATACGGTGATGGATCT
TTCCACCGGCAAGAATATTCACGAAACACGCGAGTGGATTATCCGTAACAGCCCGGTGCCGATCGGTACCGTGCCGATTT
ATCAGGCATTGGAAAAAGTCGACGGTAAAGCCGAAGAGCTGACCTGGGAGATTTTCCGCGATACGTTGATCGAACAGGCC
GAGCAGGGTGTCGATTACTTCACCATCCATGCCGGTGTGCGTTTGGCGTATGTGCCGATGACTGCAAAACGCATGACCGG
TATTGTATCGCGCGGTGGCTCGATCATGGCGAAATGGTGTTTGGCGCATCATCAGGAAAGTTTCCTGTACACGCATTTTG
AAGACATCTGCCAGATCATGAAAGCCTATGATGTCAGTTTCTCGCTGGGTGATGGGCTTCGTCCCGGTTCCATTTACGAC
GCAAACGACGAAGCGCAGTTTGCCGAACTGAAAACGTTGGGTGAGTTGACGCAAATTGCGTGGAAGCACGATGTGCAGAC
CATGATCGAAGGCCCAGGTCATGTGCCAATGCATTTGATCAAGGAAAACATGGAGTTGCAGTTGAAATATTGCGATGAAG
CGCCTTTTTATACGTTGGGTCCGCTGACGACCGATATTGCACCCGGCTATGATCATATTACATCCGCCATCGGCGCGGCC
ATGATCGGCTGGTACGGTACCGCGATGTTGTGCTATGTGACGCCTAAGGAGCATCTGGGTTTGCCGGATAAGGACGATGT
CAAGGATGGTATCATTACCTACAAAATCGCCGCGCATGCGGCCGATCTGGCGAAAGGGCATCCCGGTGCGCAAATCCGCG
ATAATGCGTTGTCCAAGGCACGTTTTGAATTCCGTTGGGAAGATCAGTTCAATCTTAGCCTCGATCCTGATAAGGCACAG
CAATTCCATGATGAAACCTTGCCACAGGATGGCGCCAAAGTGGCGCATTTCTGCTCGATGTGCGGTCCGCATTTTTGTTC
CATGAAGATTACCCAGGATGTCCGGGAATATGCCGCCAATCAGGGCGTAGCGGAAGAAGAGGCATTAAAGCTGGGTATGG
AACAAAAATCAGCCGAATTCAAGGAAAAAGGTGCTGAGATTTACAGTAAGTTGTAA

Protein sequence :
MSITVLNPKNFLSATAQVDEAAVKPLPNSRKIYVQGSRPDIQVPMREIRQSDTTTSMGGEKNPPIWVYDTSGPYTDPAVK
IDIRSGLPALREKWIAERDDTEILASHNSAYSQARLQDPKLADMRFNLQRLPRRAMTGLNVTQMHYARRGIITPEMEYIA
IRENQRVEAMNVQNHELLARQHPGQDFGASLPKMITAEFIRAEVARGRAIIPANINHPESEPMIIGRNFLVKINANIGNS
ALGSSIQEEVEKMTWAIRWGGDTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRDTLIEQA
EQGVDYFTIHAGVRLAYVPMTAKRMTGIVSRGGSIMAKWCLAHHQESFLYTHFEDICQIMKAYDVSFSLGDGLRPGSIYD
ANDEAQFAELKTLGELTQIAWKHDVQTMIEGPGHVPMHLIKENMELQLKYCDEAPFYTLGPLTTDIAPGYDHITSAIGAA
MIGWYGTAMLCYVTPKEHLGLPDKDDVKDGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLSLDPDKAQ
QFHDETLPQDGAKVAHFCSMCGPHFCSMKITQDVREYAANQGVAEEEALKLGMEQKSAEFKEKGAEIYSKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73