Gene Information

Name : NAL212_3034 (NAL212_3034)
Accession : YP_004295974.1
Strain : Nitrosomonas sp. AL212
Genome accession: NC_015222
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 3027190 - 3029070 bp
Length : 1881 bp
Strand : -
Note : PFAM: IstB-like ATP-binding protein; Integrase, catalytic core; KEGG: mms:mma_2809 transposase IstA

DNA sequence :
ATGGTTATGTATGCAAAGATACGGCGGATGTATTACCGTGAACATTTGTCAATTAATGAGATTCAGCGCCGCACGAGTCT
GTCACGGAACACGATAAAGAAGTGGTTGAAAGCGCCAAACGACAGCGCGGTGAAATATCAGAGGGCGAAGAAGCCTGGCA
AGCTGACACTATTTGAATCCAGGTTGCTGTTGGCGCTAGAAGCGGATGCACGTCGTCCGAAGAAGGATCGACGCACTGCG
TTGATGCTGTTCAAAGAGATATTGAGCGAAGGCTATACGGGCGGTTATAGCATTGTTTGCGATTTTATCCGAGAGTGGCG
TAATCAAGGCAGTCAGAGTAAATCGGTGTATGTGCCGCTGCGGTTTACGTTGGGTGAGGCTTTTCAGTTTGACTGGAGCG
AAGAGTGGCTGGTGATTGGCGGCATTCATCGCAAGGTGTTGGCAGCACACACCAAGCTATGCGCCAGTCGCGCTTTCATG
TTGTCGGGTTATCCGTCACAAAGCCACGAGATGTTGTTTGAAGCTCATACTCGTGCATTCACAGCGTTTGGCGGGGTATC
CAGGCGCGGCATTTACGACAACATGAAGACGGCCGTGGACAAAGTCTCTAAAGGTAATGGACGCATCGTAAATACGCGGT
TTTTTGCCATGACCGCGCATTATCTGTTTGATCCGGATTTCTGCAATGTTGCTTCCGGCTGGGAGAAAGGTGTCGTCGAG
AAGAATGTTCAGGATATGCGCCGCCGCCTTTGGAATGAAGCCAAACAGCAGCAATTCAGTTCATTCGATGATCTGAACCG
ATGGCTTGAGACGCGCTGCCGCGCGTTGTGGTCAGAAATTCAGCATCCGGATTACGCGGGTATTACCCTTGCCGATGCAC
TGGAGCAGGAGCAATTGTACTTGATGCCGATGCCAGCGCCGTTCGATGGCTATATTGAAGTGCTGGCGCGCGTATCCAGC
ACGTGTCTGGTCGCACTGCAGCGCAATCGTTATTCCGTACCTTGCCGCCTGGCCAACCAGATGGTAGCCGTTCATCAGTA
TGCCGACCGTATCGAGATCGTTCATAACAATGCTATAGCAGCCTGTCATACCCGGTTGCTGGATAGCGACCAAGTCAGCT
ATGACTGGCAACATTATATTCCGGTCATTGAGAAGAAACCGGGCGCCTTGCGCAACGGCGCGCCATTTGCTGAATTACCA
GTACCCTTGCTGCAGTTGCAAACGGCATTGCGGCGTAGAGAACGCCAACAGGCTGATCGAATCATGGCAAAAGTGCTCAG
CCTGGTGCCGACGCATGAGCTGGAAGCTGTGTTGGTCGCTGTTGAACTGGTGCTGGAATCCGGCGTCCCCAGTGCCGAGC
ATGTCTCCAATGTATTGGCGCGGCTGAAACACACTGACGTACCAGCGTCAGTGGAAACAACACTGAAACTCAATGAAGAA
CCGCAGGCCGATACGGCGCGCTATGACCGCTTGAACAAGCAGGAGGTGCCGCATGTCTGCATACTTGCGCAATTCAAAGC
GCTGAAATTATATGGCATGGCCAGTTCCTATGCTGAACTGAGGCAACAGAGTACGCCCGATGTCGCTGACAGCTTTAATT
TCGCAGACACATTGCTAAACCAGTTACTCCAGGCTGAAACAACCGAGCGCAACCTCCGTTCCATCCGCTATCAGACCCAA
GCCGCCAGATTCCCTGTGCAGCGTCACTTACAGGGCTTTGACTTCAGTCAGTCCAAAGTCGATCAACAACTGATTTATCA
ATTGGCCACGATGGAATTTACCGCCGCCGCACAGAATCTTGTGCTGGTTGGCGGCACCGGTACCGGAAAAAACGCACCTC
GCCATCGCCATCGGCACTTTAGGCATACAGCATCACAATAA

Protein sequence :
MVMYAKIRRMYYREHLSINEIQRRTSLSRNTIKKWLKAPNDSAVKYQRAKKPGKLTLFESRLLLALEADARRPKKDRRTA
LMLFKEILSEGYTGGYSIVCDFIREWRNQGSQSKSVYVPLRFTLGEAFQFDWSEEWLVIGGIHRKVLAAHTKLCASRAFM
LSGYPSQSHEMLFEAHTRAFTAFGGVSRRGIYDNMKTAVDKVSKGNGRIVNTRFFAMTAHYLFDPDFCNVASGWEKGVVE
KNVQDMRRRLWNEAKQQQFSSFDDLNRWLETRCRALWSEIQHPDYAGITLADALEQEQLYLMPMPAPFDGYIEVLARVSS
TCLVALQRNRYSVPCRLANQMVAVHQYADRIEIVHNNAIAACHTRLLDSDQVSYDWQHYIPVIEKKPGALRNGAPFAELP
VPLLQLQTALRRRERQQADRIMAKVLSLVPTHELEAVLVAVELVLESGVPSAEHVSNVLARLKHTDVPASVETTLKLNEE
PQADTARYDRLNKQEVPHVCILAQFKALKLYGMASSYAELRQQSTPDVADSFNFADTLLNQLLQAETTERNLRSIRYQTQ
AARFPVQRHLQGFDFSQSKVDQQLIYQLATMEFTAAAQNLVLVGGTGTGKNAPRHRHRHFRHTASQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAN85144.1 unknown Not tested Hrp PAI Protein 3e-141 60
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 5e-101 48
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 4e-79 43