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Name : NAL212_2917 (NAL212_2917) Accession : YP_004295864.1 Strain : Nitrosomonas sp. AL212 Genome accession: NC_015222 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2903690 - 2905378 bp Length : 1689 bp Strand : + Note : PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: net:Neut_0508 type II secretion system protein E DNA sequence : ATGGAAGGATCCGTGCAAATCGCGAGCAAGCAGCCCATTGATCTCAATCAATTGGCTGAAATTCGCCGCAAAGCCGCAGC TCAAGGTGTTTCTGTCATCCAGATCCTGGAAGAAGATAGCGCTTATACGCCCGATGAGCTGATGCAGCACCTAGGGCAAT TGATGCGCATGCCCGTTCTGGAGATGAAGGAGATTCATACATTACAACCCGCTTTTGATATTTTGCCGTTCAGTGAAGCG ATGCGGCATGAATGTGTATTATTCTACAACGGCCAAAACTATTTATTCGCGATCAGCAATCCTTTCTCCGGGAAATTGCG TGCATGGGCGGAAGAGCGGTTTGATCGGGCGGTTGAATGGTATTTGGTACACCCGGCCGATTTGAGTGCTTTCTTCACCC AGCAAGAAAAAACCATGCGTGCTATGGATCAAGTACTGTCATCGGCGGAGCTGGACAAAATACAAAGCGGCATTGAAGAC TTATCGTTGAAAAGCATTAATGAGGGTACCAGCAAAGTAGTACGTCTGGTACATTCCACCTTGTATGATGCGCATAAATC GCAAGCCAGTGATATACACTTGGAAATGGCTCCGGGTATGCTATCGATTAAATACCGCATTGACGGCGTATTGACGGCTA TTGGCACCATACAAGGTGCCGATCTGGCTGAGCAAGTCATTTCCCGCATCAAAGTGATGTCCGAGCTGGATATTGCCGAG CGCAGGGTGCCGCAAGACGGCCGGTTTAAAATTGCTATTCAAGGACGGGAAATAGATTTCCGGGTTTCCATCATGCCAAG CATTTTCGGCGAAGATGCGGTGCTGCGTATCCTCGATCGTCAGGCGTTATCCGATCAACTTGAAGGCCTAACCCTAAATC AGCTGGGTTTTAATCAGGCAGCGATTGCGAGTATTCGCCGCCTAAGCTCCGAGCCTTATGGCATGCTGCTGGTTACCGGC CCGACCGGCAGCGGTAAGACGACGTCTTTATATGCTGCGATATCGGAAGTGAACAAAGGTCATGACAAAATCATCACGAT CGAAGATCCGATTGAATATCAGCTTTCGGGGGTTTTGCAGATACCGGTTAATGAGAAAAAAGGACTCACATTCGCGCGTG GTTTGCGTTCAATTTTGCGGCATGATCCCGACAAAATTATGGTGGGCGAGATCCGCGATGCCGAAACTGCGCAAATTGCC ATACAGGCCGCACTGACCGGTCACCTGGTATTTACCACGGTGCATGCGAACAACGTATTTGATGTTATTGGCCGGTTTTC ACATATGGGCGTGGATCCCTATAGTTTTGTATCCGCCTTGAACGGCATTGTCGCGCAAAGATTGGTGCGCTTGCTATGTA CGCATTGCGCCGTGGATGAACGCCCCGAAGACAGTGTAATTGAGGAATCCGGCATTCCTCAGGATCAGGCAAGCCATTAC ACATTCCGCAATGGTAAAGGCTGCGGGCAATGCCGCGGCAGCGGTTTCCGCGGCAGAAATGCCATTGCAGAAATTTTATT GCTGAACGATGAAATCCGTGAATTGATTGTCGCGCACGAACCGATCCGGCGTATTAAGGAAGCAGCCCGGGACAATGGCA CCCGCTTCTTGCGCGAAGCGGCATTGGATATGGTCAAGCAGGGATTAACCAGTTTGGAGGAGGCTAATCGTGTCACGATT GTGGCGTGA Protein sequence : MEGSVQIASKQPIDLNQLAEIRRKAAAQGVSVIQILEEDSAYTPDELMQHLGQLMRMPVLEMKEIHTLQPAFDILPFSEA MRHECVLFYNGQNYLFAISNPFSGKLRAWAEERFDRAVEWYLVHPADLSAFFTQQEKTMRAMDQVLSSAELDKIQSGIED LSLKSINEGTSKVVRLVHSTLYDAHKSQASDIHLEMAPGMLSIKYRIDGVLTAIGTIQGADLAEQVISRIKVMSELDIAE RRVPQDGRFKIAIQGREIDFRVSIMPSIFGEDAVLRILDRQALSDQLEGLTLNQLGFNQAAIASIRRLSSEPYGMLLVTG PTGSGKTTSLYAAISEVNKGHDKIITIEDPIEYQLSGVLQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDAETAQIA IQAALTGHLVFTTVHANNVFDVIGRFSHMGVDPYSFVSALNGIVAQRLVRLLCTHCAVDERPEDSVIEESGIPQDQASHY TFRNGKGCGQCRGSGFRGRNAIAEILLLNDEIRELIVAHEPIRRIKEAARDNGTRFLREAALDMVKQGLTSLEEANRVTI VA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-78 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-78 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NAL212_2917 | YP_004295864.1 | type II secretion system protein E | VFG2048 | Protein | 2e-78 | 45 |
| NAL212_2917 | YP_004295864.1 | type II secretion system protein E | VFG0233 | Protein | 1e-72 | 44 |
| NAL212_2917 | YP_004295864.1 | type II secretion system protein E | VFG2426 | Protein | 3e-70 | 41 |
