Gene Information

Name : NAL212_2724 (NAL212_2724)
Accession : YP_004295675.1
Strain : Nitrosomonas sp. AL212
Genome accession: NC_015222
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2683587 - 2684498 bp
Length : 912 bp
Strand : -
Note : KEGG: nmu:Nmul_A0748 tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence : 
ATGAGAGTTCCTGAGTTAAATACTGGACTGCTGGATGAGTTTTCTGATGCTTTATGGCTCGAAGATGGCTTGTCGCGTAA
TACGCTGGACAGCTATCGCAATGATCTGCAACTTTTTAGTGAATGGTTGAAGAGACGTAATCCGAGTAATAGTATGTTAA
CCGAGGCGACAAATTCTGATTTGCTGGAATTTCTTGCATCTAGAGTTGCAGCTAAGATGAAAGCCAGTACTACGAGCCGA
GAGTTATCCAGTTTAAAGCGTTTTTATCGATTTCTACTGCGTCAGGGAAAAATTGCAATTGACCCGAGTCTTAATATTGA
AACGCCTAAACTGCAACGCCACTTGCCGGAAAGCCTCTCAGAAAAAGAAGTTGAGCTGCTGCTAAGTGCACCGGATCTGG
CGCAGCCGCTTGGCTTGCGCGATCGTGCCATGCTTGAGGCTTTGTATGCCAGTGGATTACGGGTATCGGAATTGATCAAC
CTTAAGTATTCGCAAGTCAGCATGGATATGGGGGTATTGCGGGTCATGGGTAAGGGCAGAAAAGAGCGCCTTGCGCCAGT
GGGAGAAGAATCACTCCAATGGTTGAACCGTTATACTAAAGAGGCGAGGCCTCTGCTGCTAAATGGTATCGTTACGGATA
CCATATTTGTGACAACTCGTGGTGCCGCTATGACACGCCAAGCTTTTTGGTACCTTATCAAAAGGTACGCGCAATTGGTG
GGCATCGCCAAACAGTTATCGCCACACACGTTACGCCACGCATTTGCCACTCATTTGTTAAATCATGGTGCTGATTTGCG
CGTTGTGCAATTACTATTGGGGCATGCGGATATATCAACCACACAAATTTACACACATATTGCACGAGAACGTCTTAAAC
AGCTTCACGCCAAGCATCATCCACGCGGATAA

Protein sequence : 
MRVPELNTGLLDEFSDALWLEDGLSRNTLDSYRNDLQLFSEWLKRRNPSNSMLTEATNSDLLEFLASRVAAKMKASTTSR
ELSSLKRFYRFLLRQGKIAIDPSLNIETPKLQRHLPESLSEKEVELLLSAPDLAQPLGLRDRAMLEALYASGLRVSELIN
LKYSQVSMDMGVLRVMGKGRKERLAPVGEESLQWLNRYTKEARPLLLNGIVTDTIFVTTRGAAMTRQAFWYLIKRYAQLV
GIAKQLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHIARERLKQLHAKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-59 50
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-59 50