Gene Information

Name : NAL212_2660 (NAL212_2660)
Accession : YP_004295613.1
Strain : Nitrosomonas sp. AL212
Genome accession: NC_015222
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2616441 - 2617223 bp
Length : 783 bp
Strand : -
Note : KEGG: pst:PSPTO_B0039 transposase/IS protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAATTTGCAATTACAACGCATCCTGCATGCCTGTGACGTATTAAAACTGCCTGCCATCGCCACAGAGTGGTCAGCAAT
GGCTGATCGCAGCGCTGCACAAAGCAATACCTTTGCGGACTTCCTCGACAATTTACTCCAAGTAGAGATAGAGGCCAGAA
GGCTGCGTACGCGCGAAGTATTACTTAAAATGGCAGGATTGCCCGCCATCAAACACTTCGACGATTTTGACTTCCACTTC
GCCACCGGCGCACCACGTAAACAGCTGCAGGAATTAACCAGTCTGGCGTTTATTGAACGTACCGAAAACATTGTACTGCT
CGGCCCAAGTGGCGTAGGTAAAAGTCATCTGGCCATTGCGCTGGCTTACAGTGCCATCATGCGCGGTATAAAAGTCCGTT
TTATCACTGCAGCTGATTTAATGCTGCAGTTGGCCACTGCCAAAAAGCAAGGGAGACTGGATACGTATCTCAAACGCAGT
GTGCTATCCCCTAAGCTACTAGTGATTGACGAAATAGGCTACCTCCCCTTTGGCAGGGAGGAAGCCAATCTGTTCTTCAA
CGTCATTGCCAAGCGCTACGAGCAAGGCAGTGTAATCGTCACCAGCAACCTACCATTCTCGCAATGGTCAACTGCTTTTG
CTGATGATCAAACCTTAACCGCAGCATTATTGGATAGATTGCTGCATTATGCGCATATCGTGCAAATCAGTGGTAACAGC
TACCGGTTAAAAGGAAAGAAATCAGCAGGGATAGCTCCCACTGTGGAACAAGTTAAACAATGA

Protein sequence :
MNLQLQRILHACDVLKLPAIATEWSAMADRSAAQSNTFADFLDNLLQVEIEARRLRTREVLLKMAGLPAIKHFDDFDFHF
ATGAPRKQLQELTSLAFIERTENIVLLGPSGVGKSHLAIALAYSAIMRGIKVRFITAADLMLQLATAKKQGRLDTYLKRS
VLSPKLLVIDEIGYLPFGREEANLFFNVIAKRYEQGSVIVTSNLPFSQWSTAFADDQTLTAALLDRLLHYAHIVQISGNS
YRLKGKKSAGIAPTVEQVKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-62 66
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-74 56
unnamed CAA21402.1 - Not tested HPI Protein 5e-74 56
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-74 56
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-74 56
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-74 56
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-73 56
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-74 56
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-74 56
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-74 56
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-74 56
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-74 56
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-74 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NAL212_2660 YP_004295613.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 2e-62 66
NAL212_2660 YP_004295613.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 2e-74 56
NAL212_2660 YP_004295613.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 2e-74 56
NAL212_2660 YP_004295613.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 2e-73 56
NAL212_2660 YP_004295613.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 2e-74 56