|
Name : NAL212_0188 (NAL212_0188) Accession : YP_004293307.1 Strain : Nitrosomonas sp. AL212 Genome accession: NC_015222 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 24029 - 26047 bp Length : 2019 bp Strand : - Note : SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: nmu:Nmul_A0388 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal DNA sequence : ATGGGGACATTCAAGGATTTTGACGCGACGGTATTTAAAGATTTGACCAGTGCGGTGCGCGCATTGGCGATGGATGCCGT GCAAAAAGCCAATTCTGGTCACCCCGGTATGCCAATGGGTATGGCTGAAATTGCTGAGGTACTGTGGATTCACCACCTGC GTCATAATCCTGGCAATCCGGGTTGGGTTGACCGTGACCGGTTTGTGCTATCTAACGGACATGGATCCATGTTGATTTAT GCTTTGTTACATTTGACCGGTTACGATTTACCGATGGAAGAAATTAAAAAATTTCGCCAATTCCATTCAAAAACACCCGG CCATCCGGAGTATGGTTACACGCCAGGTGTAGAAACCACTACCGGCCCCTTGGGTCAGGGTATCACCAATGCGGTAGGCA TGGCTTTGGCAGAAAAAGTATTGGCAGCCGAATTCAATCGCCCTGGTTACAATATTGTAGATCATCACACGTATGTTTTT CTCGGTGATGGTTGTTTAATGGAAGGCATCTCGCATGAAGCTTGCTCATTAGCCGGCACTTTGGGTTTGGGCAAACTCAT CTGTTTTTATGATGATAATGGCATTTCCATAGATGGTCATGTGGAAGGCTGGTTTACCGATGATACGCCTAAACGTTTCG AATCTTATGGCTGGCATGTGGTGCCTAATGTCAATGGCCATGATCCTGTAGCGATTGAAGCTGCGATTGAAGCTGCGAAG CAAGTCAACAACAAGCCATCAATGATTTGCTGCAAAACGGTCATCGGATTGGGTTCTCCGAATATGGCCAATACCCATTC TGTGCATGGCGCCGCATTAGGTGATGCGGAAATCGCCGCTACTCGCCCGCATATTGGTTGGCATCACCCACCTTTTGAAA TTCCGCAAAATGTTTATAGTGTCTGGGACGCAAGAGCCAAAGGTCAGAAGCTGGAAACGGAATGGAATCAGAAGTTTGCG GAATATGCAGAAAAGCATCCCGCGGAGGCGGCGGAATTTAATCGTCGAATGGCGGGAGAATTGCCTGCGAATTGGAGCAG TCATGTTGAAAATGTTATTAATCAAGTCAATGCGAAAGGGGAATCCATCGCGAGCCGCAAGGCTTCGCAAAATGCAATTG AAGGCTTAGCGCCCATTCTGCCGGAATTGATTGGGGGATCTGCCGATTTGGCCGGCTCCAACCTGACACTATGGTCAGGT TCCAAAGGTGTCGACAATAATGCCGGTGGCAATTACGTCTATTATGGTGTACGTGAATTTGGGATGAGCGCAATGATGAA CGGATTATCGTTGCACGGCGGTCTGATTCCTTACGGCGCAACCTTTTTGATGTTTTCAGAATACGCTCGTAATGCACTGC GTATGGCCGCTTTGATGAAAATCCGTAACATCTTTGTCTTTACACATGATTCAATTGGTCTGGGCGAGGATGGTCCAACA CATCAACCGGTAGAACAAACAGCCACATTGCGTTATATCCCCAATATGGATGTATGGCGGCCTTGTGACACCGTTGAATC AACCGTTTCATGGGTTCGTGCCATCGAGCGTAAAGACGGTCCTTCCACATTAATTTTCAGCCGCCAGAATCTGCCGTTTC AAAAACGAGATGCGGCAATCATCAAACAAATTGAGAAAGGTGGCTATGTATTAGCTGAAGCAAGTAACAACAGCAAACCG CAAGTTATTCTCATCGCTACCGGTTCGGAAGTCGGTTTAGCCGTGAATGCGCAGAAAACGTTGGCGGATGAGGGCATTCA TGCACGCGTTGTTTCCATGCCCTGTACCAATGTTTTTGACCGCCAGGAACCATCTTACAAGGAAAGTGTCTTGCCAAAAG GTGTCAAACGCGTGGCCATTGAAGCTGGGGTGACGGATTTCTGGCGTAAATATGTGGGGTTAGATGGCGCAGTAGTGGGG ATTGATACTTTTGGTGAATCAGCGCCTGCAGATGTGCTATTCAAGCATTTCGGCTTTACTGTCGAAAACGTAGTCAGAAC AGTAAAAAGCGTTCTCTAA Protein sequence : MGTFKDFDATVFKDLTSAVRALAMDAVQKANSGHPGMPMGMAEIAEVLWIHHLRHNPGNPGWVDRDRFVLSNGHGSMLIY ALLHLTGYDLPMEEIKKFRQFHSKTPGHPEYGYTPGVETTTGPLGQGITNAVGMALAEKVLAAEFNRPGYNIVDHHTYVF LGDGCLMEGISHEACSLAGTLGLGKLICFYDDNGISIDGHVEGWFTDDTPKRFESYGWHVVPNVNGHDPVAIEAAIEAAK QVNNKPSMICCKTVIGLGSPNMANTHSVHGAALGDAEIAATRPHIGWHHPPFEIPQNVYSVWDARAKGQKLETEWNQKFA EYAEKHPAEAAEFNRRMAGELPANWSSHVENVINQVNAKGESIASRKASQNAIEGLAPILPELIGGSADLAGSNLTLWSG SKGVDNNAGGNYVYYGVREFGMSAMMNGLSLHGGLIPYGATFLMFSEYARNALRMAALMKIRNIFVFTHDSIGLGEDGPT HQPVEQTATLRYIPNMDVWRPCDTVESTVSWVRAIERKDGPSTLIFSRQNLPFQKRDAAIIKQIEKGGYVLAEASNNSKP QVILIATGSEVGLAVNAQKTLADEGIHARVVSMPCTNVFDRQEPSYKESVLPKGVKRVAIEAGVTDFWRKYVGLDGAVVG IDTFGESAPADVLFKHFGFTVENVVRTVKSVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 67 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 64 |
