Gene Information

Name : NAL212_2044 (NAL212_2044)
Accession : YP_004295042.1
Strain : Nitrosomonas sp. AL212
Genome accession: NC_015222
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2001780 - 2001983 bp
Length : 204 bp
Strand : +
Note : PFAM: Prophage CP4-57 regulatory; KEGG: vcj:VCD_002586 transcriptional regulator

DNA sequence : 
ATGAAGTTTGTAAAGCTAGAGACGGTGAAATCAATGACTGGTCTATCGAGAAGCTCAATATACCAGTACATCAACGAAGG
CAGATTTCCCAATCAAGTAAGGTTAGGATCTCGATCTGTGGCATGGGTTGCAAGTGAGGTGGATGAATGGATGAACTCCT
GCATCGCTAATAGAGGCAACATAGAAGTATTGAAGAACGTTTAA

Protein sequence : 
MKFVKLETVKSMTGLSRSSIYQYINEGRFPNQVRLGSRSVAWVASEVDEWMNSCIANRGNIEVLKNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 5e-13 56
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 5e-13 56
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-13 56
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-12 52
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-12 52
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 8e-13 52
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 8e-13 49
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-08 47
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 8e-10 46
unnamed CAA21398.1 - Not tested HPI Protein 1e-09 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NAL212_2044 YP_004295042.1 phage transcriptional regulator, AlpA VFG1118 Protein 1e-13 56
NAL212_2044 YP_004295042.1 phage transcriptional regulator, AlpA VFG1141 Protein 3e-13 52