|
Name : Metbo_0866 (Metbo_0866) Accession : YP_004290088.1 Strain : Methanobacterium sp. AL-21 Genome accession: NC_015216 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : 1.1.1.22 Position : 832286 - 833632 bp Length : 1347 bp Strand : + Note : TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: mpl:Mpal_0929 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal DNA sequence : ATGGGGAATCTGTTGGAGAGGATTCAAAAAAGAACGGCTATAATTGCTATAGTTGGATTGGGTTATGTTGGCTTGCCTAC TGCGATTTTCTTCGCTGAGAATGGGTTTAAAGTAATTGGGGTTGAAAAGGATGAAGTTAAACTAACTAAAATAAAAAAGG GTATATCAACTATAGGTGAACTGAATTTAGACATGAGGTTATCAAAAGTAGTAAATGAAAAAAAATTGATTGGAACTGCT GATCTTAAATGGGCAACAGAACAATCTGATATTATAATTTCAATTGTACCCACACCCGTAGACGAATTTAAAGATCCGGA TCTAACACCAATTAAATCTTCAGGTGAACAAATTGCCAAAGGATTAGCTGAAGGTAAACTTGTAATTTTAGAATCAACTG TTTATCCTGGAGTAACAGAAGAATGTTTACAGCCAATATTAGAACAATCCGGACTTAAAGCAGGAACAGATTTTGGACTA GCTTACTGCCCTGAAAGATACAATCCTGGTGATGTTGATCATGGTATTGAAAAGGTTTCTAGAGTTGTGGGTGGGATAAC ACCTGAATGGGCTGAAGTAACTCGTGAACTTTATAAAATTATTATTAATGAAGATGTCAAAGTATTAAATAATATAAAAA CAACAGAAGCTGCTAAGGTAATTGAAAACACACAGCGAGATTTAAACATAGCTTTAATGAATGAACTTGCAATGATATTT GAACGTTTAGACATAGATGTGATGGATGTAATTGAAGGTGCAAGTACTAAATGGAATTTCAACGTGTATTATCCTGGAGC GGGTGTTGGGGGGCATTGTTTACCTGTAGATCCGTATTATTTGGTTAAAAAGGCCAAAGAACTTGGATACCACTCAAAAG TTATTGCAGCAGGCAGATCAATTAATGATAACATGCCTTTGCATGTGATGAATCTTGTTCAGGATGCTTTAAACGAACAG GAAAAATCAATAAAAAATTCCAAGATCGTTGTTTTAGGATTTTCATACAAAGAAAATGTAGGTGATCCAAGAGAATCCCC TGCAAAAACTTTAACCAAAAACTTAGTTTGGAAGGAAGCTGAAGTAGTAATAGTTGATCCATATATCGAGGAAATCAATG AAAAATTTGGAGTCTTAAATAATAAATTCTCAGATGCAATAAATGGGGCTGATGCATTGGTTCTCATGACAGCACATGAT GATTTTAAATCAATAGATTTTAACGAAGTTTTAAAATCAATGAATACTCCAATAATTGTTGATGGGAGAAGAATTTATGA TCCTGATGAATTGAGGGATATGGGCTTCCATTACAAAGGTGTTGGAGCTGTAAATACAGTAAAATAA Protein sequence : MGNLLERIQKRTAIIAIVGLGYVGLPTAIFFAENGFKVIGVEKDEVKLTKIKKGISTIGELNLDMRLSKVVNEKKLIGTA DLKWATEQSDIIISIVPTPVDEFKDPDLTPIKSSGEQIAKGLAEGKLVILESTVYPGVTEECLQPILEQSGLKAGTDFGL AYCPERYNPGDVDHGIEKVSRVVGGITPEWAEVTRELYKIIINEDVKVLNNIKTTEAAKVIENTQRDLNIALMNELAMIF ERLDIDVMDVIEGASTKWNFNVYYPGAGVGGHCLPVDPYYLVKKAKELGYHSKVIAAGRSINDNMPLHVMNLVQDALNEQ EKSIKNSKIVVLGFSYKENVGDPRESPAKTLTKNLVWKEAEVVIVDPYIEEINEKFGVLNNKFSDAINGADALVLMTAHD DFKSIDFNEVLKSMNTPIIVDGRRIYDPDELRDMGFHYKGVGAVNTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-59 | 45 |
