Gene Information

Name : Metbo_1860 (Metbo_1860)
Accession : YP_004291053.1
Strain : Methanobacterium sp. AL-21
Genome accession: NC_015216
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1906068 - 1906565 bp
Length : 498 bp
Strand : +
Note : manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: dth:DICTH_0400 arsenate reductase; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence : 
ATGGTCAAAAAAAGAGTTTTATTCATGTGTATCCATAATGCAGCCAGATCACAAATGGCCGAAGGATTGTTCAGGCATTT
TTATGGAGATGGTTTTGATGTTTACAGCGCAGGAAGTGAACCTCAAGGGGTAGACCCACTGGCAATAAAGTGTATGGATG
AAATTGGAATTGACATTTCTAACCACAGATCTAAGAGTTTAAAGGAATTCGAAGGCCAAAACTTCGATTATGTAATAACA
GTTTGTGGAAATTCATACAATGCCTGTCCATTCTTTGTAGGAGGTATAAAATATTTCAAACAAGCATTTGAAGATCCATC
ATCCTTTGAAGGAAACGAAAAAGAAAAATTAGAGTTATTCAACAAAGTCCGGGATGAATTAAGCTTCTGGTTAAATGATT
TGTACTATTCATACTTGCTGCCTGACGATGAAAGAGTTGTTGAAGAAGATAAGGATGTTTGCTGTGGATCAATTGATAGG
GAATTCTCATGCAGATAA

Protein sequence : 
MVKKRVLFMCIHNAARSQMAEGLFRHFYGDGFDVYSAGSEPQGVDPLAIKCMDEIGIDISNHRSKSLKEFEGQNFDYVIT
VCGNSYNACPFFVGGIKYFKQAFEDPSSFEGNEKEKLELFNKVRDELSFWLNDLYYSYLLPDDERVVEEDKDVCCGSIDR
EFSCR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 8e-17 41
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metbo_1860 YP_004291053.1 protein tyrosine phosphatase BAC0032 Protein 1e-17 42
Metbo_1860 YP_004291053.1 protein tyrosine phosphatase BAC0581 Protein 6e-21 42
Metbo_1860 YP_004291053.1 protein tyrosine phosphatase BAC0580 Protein 1e-17 41