Gene Information

Name : Metbo_1263 (Metbo_1263)
Accession : YP_004290477.1
Strain : Methanobacterium sp. AL-21
Genome accession: NC_015216
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1268804 - 1269685 bp
Length : 882 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Vitamin B6 biosynthesis protein; KEGG: mst:Msp_0072 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein

DNA sequence :
ATGTTACATGGAACAGATGTTTTAAAGAAAGGTTTCGCTAAAATGACAAAGGGCGGAGTTATAATGGATGTTGTAAATGC
TGAACAGGCAGCTATTGCAGAGGAAGCTGGTGCTGTTTCAGTCATGGCCCTTGAAAAGGTACCTGCTGATATTCGTGCAG
AAGGCGGTGTAGCAAGGATGGCTGACCCATCTAAGGTTCGCGAAATAATAGATGCAGTTAGTATTCCTGTTATGGCTAAA
GTTCGTATAGGTCACTTCGTAGAGGCACAAGTCTTACAATCACTTGGTGTTGATATGATTGATGAAAGTGAAGTCTTAAC
ACCTGCAGATGAAAAATATCACATAGACAAGAAAAATTTCACTATACCATTTGTATGCGGTGCAAGAAACCTTGGTGAAG
CTTTGAGAAGAATTGATGAAGGAGCTGCAATGATCCGTACTAAGGGTGAAGCTGGTACAGGTAACATTGTTGAAGCTGTA
AGGCACAGCAGACAAATATCAAGCACAATAAGAGAACTTCAAAACAAAACTGAAGAAGAACTCTGGTCAGTAGCACGTGA
AATTGAATCCCCATTAGAACTAGTTAAACTCACAGCAAAAGAAGGTAGATTACCTGTTGTGAACTTTGCAGCAGGAGGAG
TTGCAACACCAGCAGATGCAGCTCTCATGATGCAGTTAGGTTCAGATGGAGTATTTGTTGGATCAGGTATATTCAAATCA
GAACAGCCTTCTTTAGTTGCAAAAGCTATTGTTGAAGCAACTAACAACTTTAAAGATGCTGAACTAATTGCTGAAGTATC
AACAGATTTAGGTAAAGCAATGCCAGGGCTTGAAATCAGCACAATACCAGAAGAAGAGAAACTACAAAAAAGAGGATGGT
AA

Protein sequence :
MLHGTDVLKKGFAKMTKGGVIMDVVNAEQAAIAEEAGAVSVMALEKVPADIRAEGGVARMADPSKVREIIDAVSIPVMAK
VRIGHFVEAQVLQSLGVDMIDESEVLTPADEKYHIDKKNFTIPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGNIVEAV
RHSRQISSTIRELQNKTEEELWSVAREIESPLELVKLTAKEGRLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKS
EQPSLVAKAIVEATNNFKDAELIAEVSTDLGKAMPGLEISTIPEEEKLQKRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-75 65
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-75 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-75 64