Gene Information

Name : Metbo_1253 (Metbo_1253)
Accession : YP_004290467.1
Strain : Methanobacterium sp. AL-21
Genome accession: NC_015216
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 1258510 - 1259178 bp
Length : 669 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: mka:MK1654 ATPase subunit of a ABC-type transport system involved in lipoprotein release; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAATAATAATGTACTTGAATTCGAAAATGTTTCTAAAACATATAAAATGGGAGACGAAACAATAAAAGCCCTTGATGG
ATTAAATGTGGCATTAAAGAGAGGTTCATTTAAAGCAGTCATGGGACCTTCTGGATCAGGTAAATCCACATTTCTTCATG
TTGCAGGAATACTTGACATGCCCACATCAGGTTTAATCCAGATAAATGGAAAAGAAACCAAGAAGTTATCAAATAAAGAA
CAGGCAAAACTTCGAAGAAATGAGATAGGATTTATATTTCAGAGATTTAATCTGATGTCCCAACTCACAGTCCTTGAAAA
CGTCATGCTTCCAATGATCGAAGAAAATACCAACAAAGCTATAGAACTATTAAATAAAATGGGTTTAAGTTCAAAGGCTG
ACAAGTATCCGTCGCATCTTTCAGGAGGTGAACAACAACGTGTTGCAATAGCCAGAGCCCTTATAAACGATCCTTCAATT
ATTCTGGCTGATGAACCAACAGGTGAACTCGATACTAAAAATGCAAACGCAATAATGCAGATACTCAAGGATCTGAATCA
AAAGGATGGAGTAAGCATAGTTGTTGTTACCCATAATCAAGCGTCAGCAGATTATGCAGATGAAATTCTCCATATGAGTG
ATGGAAATTTCGTTGAAAATGCAAACTAA

Protein sequence :
MNNNVLEFENVSKTYKMGDETIKALDGLNVALKRGSFKAVMGPSGSGKSTFLHVAGILDMPTSGLIQINGKETKKLSNKE
QAKLRRNEIGFIFQRFNLMSQLTVLENVMLPMIEENTNKAIELLNKMGLSSKADKYPSHLSGGEQQRVAIARALINDPSI
ILADEPTGELDTKNANAIMQILKDLNQKDGVSIVVVTHNQASADYADEILHMSDGNFVENAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-37 44
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 8e-34 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metbo_1253 YP_004290467.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 1e-43 48
Metbo_1253 YP_004290467.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 2e-41 46
Metbo_1253 YP_004290467.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 2e-39 44
Metbo_1253 YP_004290467.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 7e-36 42