Gene Information

Name : Metbo_1196 (Metbo_1196)
Accession : YP_004290412.1
Strain : Methanobacterium sp. AL-21
Genome accession: NC_015216
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1199977 - 1200171 bp
Length : 195 bp
Strand : +
Note : KEGG: mfs:MFS40622_0470 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGAAAAATAAATTAAAGGTTTACAGGGCCATGAATGATCTAACCCAGGAGGATCTAGCTAAAGAGATCAAGGTAACTAG
ACAAACTATTATTTCAATAGAAAAGCAAAAATACGATCCCTCCCTTACATTAGCCTTTAAAATAGCCAAATTTTTCAATG
TCCATATCGAAGACATCTTCTTTGACGAAGAATGA

Protein sequence :
MKNKLKVYRAMNDLTQEDLAKEIKVTRQTIISIEKQKYDPSLTLAFKIAKFFNVHIEDIFFDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-13 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 9e-09 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metbo_1196 YP_004290412.1 XRE family transcriptional regulator VFG2175 Protein 4e-09 50
Metbo_1196 YP_004290412.1 XRE family transcriptional regulator VFG2168 Protein 4e-09 50