Gene Information

Name : Metbo_1095 (Metbo_1095)
Accession : YP_004290312.1
Strain : Methanobacterium sp. AL-21
Genome accession: NC_015216
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 1092450 - 1094507 bp
Length : 2058 bp
Strand : -
Note : TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: mev:Metev_1829 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; H

DNA sequence :
ATGGATCATGATGGTTCTATGGATATGGGGCATGCTGATCATGAAACTATGGGTAAATGTGTAGTCTGTGGAGGGGATCT
TGATGAGAAACACAGACTCAAAGGTGGCCATGTACACTCTAACATGATCGATGATTTAAAAAAGAGATTTTGGATATCAT
TGATATTTACTGTGCCAATCCTTGCTTTATCTCCAACGATTCAAGAGTTAGTGGGATTGAATAATTCATTTACATTTACT
GGTGATTTATTTCTTCTTTTCATATTAGCTTCATTTGTTTATTTTTATGGCGGTTATCCATTTTTTAAAGGATTTTATAG
TGAAATTGTATCAAGAAAACCTGGAATGGACATGTTGATATCTGTTGCCATTACCAGTGCTTACATCTACAGTAGTGCAG
TAGTGTTTGGACTCAACGGAGAAGTATTTTTCTGGGAGCTTGCAACCCTAATTGATATAATGCTCATTGGACACTGGTTA
GAGATGAGGTCAGTTATGGGTGCGTCCCAGGCACTTGAAGAACTCGTTAAACTCATGCCTAAAAAGGCCCATAAAATCCT
GACTGATAAAAGTACTAGTGACGTTCCATTGGCTGAACTCCAAATTAATGACCATGTACTTGTTAAGCCTGGAGAAAAGG
TACCTGTGGACGGTGTTATCTTAGATGGTAACTCATCAATAGATGAATCCATGCTTACAGGTGAATCTGTTCCTGTGTTT
AAAAAAGTCGGTTCTGAAGTTATTGGTGGATCTATAAATGGGGATGGGTCTGTTGTTGTTGAAATTAAAAAGATCGGTAA
TGATTCATTTCTGTCTAAGGTTATATCTTTGGTTGAGCAAGCTCAATCAACTAAGTCCAAGACTCAAAATCTTGCTGACC
GCTTTGCAACCTGGCTTACTATAATTGCTTTGTTTGGTGGTTTCATAACACTTTTAATTTGGTTATATATCTCGAATTTT
GGTTTTGAATTTGCTCTTGAGAGGGCAGTGACTGTGATGGTTATTGCATGTCCCCATGCATTAGGTCTTGCTGTACCGTT
AGTTGTAGCTGTTTCAACTTCTTTATCTGCCAGAAATGGGCTTTTAATTAGAAATCGTGCATCTTTTGAAAGGTCTAGAA
ATTTAGATGCCATAATATTTGACAAAACAGGTACTTTAACAGAAGGCAAATTTGGTGTTACAGATACTGTGTCTTTAAAC
AGTGAATACACAGCTGATGAAATTTTAAAATATGCAGCATCTCTAGAGTCCTATTCGGAACATCCCATTGCTAAAGGAGT
TGTTGAATCCGCAAAGGATAGATACGATGTTGAAAATTTTAAGTCTTTACCTGGAAGGGGTGTTAAAGGTAAAATTAACC
AACATGATGTTATGGTAGTTAGTCAAGCCTATTTAAAAGAGATCAACAACGATGTAACTGACAAATCCATTGAAAAGCTT
TTCTCTCAAGGTAAAACCATGGTTTTTTTAACTGTGGATAACGTGGTTGTAGGTGCAATTGCATTGGCAGATATCATACG
AGAAGAATCTAAAGAAGCTGTGACTAATTTTAAGTCCATGGGAATCCGTTGCATTATGATAACTGGAGATAGAAAAGAAG
TTGCTGAGTGGGTGGCTAAAGAGGTGGGGGTTGATCAGTACTACGCTGAAATTTTACCTGAAGATAAAGCCATCAAGATT
CATGAAATTCAATCTGAAGGGTTGGTAGTTGCCATGACCGGAGATGGGATTAATGATGCACCGGCACTTGCACAGGCAGA
TCTAGGGATAGCAATTGGAGCAGGTACTGATGTTGCCATAGAAGCTGGGGATGTTGTTTTAGTGAGGAGCAATCCCCTGG
ATGCTGTTTACATAATCAAGCTTGCCAAATCTACATATAGAAAAATGTTTGAGAATCTAGTTTGGGGTGCTGGATACAAC
ATTTTTGCCATACCCCTAGCTGCAGGAGTACTTTACAGTGTGGGAATTTTATTAACACCTGCAGCAGGAGTTATATTGAT
GTCGGTAAGTACCATAATAGTGGCTATAAATTCGAGAACACTTAAAATTCAAAAATAA

Protein sequence :
MDHDGSMDMGHADHETMGKCVVCGGDLDEKHRLKGGHVHSNMIDDLKKRFWISLIFTVPILALSPTIQELVGLNNSFTFT
GDLFLLFILASFVYFYGGYPFFKGFYSEIVSRKPGMDMLISVAITSAYIYSSAVVFGLNGEVFFWELATLIDIMLIGHWL
EMRSVMGASQALEELVKLMPKKAHKILTDKSTSDVPLAELQINDHVLVKPGEKVPVDGVILDGNSSIDESMLTGESVPVF
KKVGSEVIGGSINGDGSVVVEIKKIGNDSFLSKVISLVEQAQSTKSKTQNLADRFATWLTIIALFGGFITLLIWLYISNF
GFEFALERAVTVMVIACPHALGLAVPLVVAVSTSLSARNGLLIRNRASFERSRNLDAIIFDKTGTLTEGKFGVTDTVSLN
SEYTADEILKYAASLESYSEHPIAKGVVESAKDRYDVENFKSLPGRGVKGKINQHDVMVVSQAYLKEINNDVTDKSIEKL
FSQGKTMVFLTVDNVVVGAIALADIIREESKEAVTNFKSMGIRCIMITGDRKEVAEWVAKEVGVDQYYAEILPEDKAIKI
HEIQSEGLVVAMTGDGINDAPALAQADLGIAIGAGTDVAIEAGDVVLVRSNPLDAVYIIKLAKSTYRKMFENLVWGAGYN
IFAIPLAAGVLYSVGILLTPAAGVILMSVSTIIVAINSRTLKIQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-94 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Metbo_1095 YP_004290312.1 copper-translocating P-type ATPase BAC0629 Protein 5e-172 60
Metbo_1095 YP_004290312.1 copper-translocating P-type ATPase BAC0079 Protein 3e-126 44
Metbo_1095 YP_004290312.1 copper-translocating P-type ATPase BAC0383 Protein 4e-100 42
Metbo_1095 YP_004290312.1 copper-translocating P-type ATPase BAC0101 Protein 3e-80 41